Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.67□□□□□ -0.38
Pdlim4P70271 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pdlim4P70271 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.67□□□□□ -0.38
Pdlim4P70271 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Gm18733-201ENSMUST00000173950 856 ntBASIC12.67□□□□□ -0.38
Pdlim4P70271 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.67□□□□□ -0.38
Pdlim4P70271 Gm6550-201ENSMUST00000187574 993 ntBASIC12.67□□□□□ -0.38
Pdlim4P70271 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.67□□□□□ -0.38
Pdlim4P70271 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.67□□□□□ -0.38
Pdlim4P70271 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pdlim4P70271 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.67□□□□□ -0.38
Pdlim4P70271 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Pdlim4P70271 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.67□□□□□ -0.38
Pdlim4P70271 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Pdlim4P70271 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Pdlim4P70271 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.67□□□□□ -0.38
Pdlim4P70271 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pdlim4P70271 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.66□□□□□ -0.38
Pdlim4P70271 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pdlim4P70271 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.66□□□□□ -0.38
Pdlim4P70271 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pdlim4P70271 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pdlim4P70271 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.66□□□□□ -0.38
Pdlim4P70271 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.66□□□□□ -0.38
Pdlim4P70271 Mir5131-201ENSMUST00000175426 93 ntBASIC12.66□□□□□ -0.38
Pdlim4P70271 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.66□□□□□ -0.38
Pdlim4P70271 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pdlim4P70271 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.66□□□□□ -0.38
Pdlim4P70271 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.66□□□□□ -0.38
Pdlim4P70271 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.66□□□□□ -0.38
Pdlim4P70271 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pdlim4P70271 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.66□□□□□ -0.38
Pdlim4P70271 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Pdlim4P70271 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pdlim4P70271 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pdlim4P70271 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Pdlim4P70271 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.65□□□□□ -0.38
Pdlim4P70271 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.65□□□□□ -0.38
Pdlim4P70271 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.65□□□□□ -0.38
Pdlim4P70271 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.65□□□□□ -0.38
Pdlim4P70271 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pdlim4P70271 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Pdlim4P70271 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pdlim4P70271 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pdlim4P70271 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pdlim4P70271 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms