Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm6P62313 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.34□□□□□ -0.27
Lsm6P62313 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.34□□□□□ -0.27
Lsm6P62313 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Gm11764-201ENSMUST00000120221 623 ntBASIC13.34□□□□□ -0.27
Lsm6P62313 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.34□□□□□ -0.27
Lsm6P62313 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Lsm6P62313 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Lsm6P62313 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Lsm6P62313 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Lsm6P62313 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Lsm6P62313 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Lsm6P62313 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm6P62313 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm6P62313 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm6P62313 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.33□□□□□ -0.28
Lsm6P62313 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm6P62313 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm6P62313 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm6P62313 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Lsm6P62313 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Lsm6P62313 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lsm6P62313 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm6P62313 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm6P62313 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm6P62313 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm6P62313 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Lsm6P62313 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.33□□□□□ -0.28
Lsm6P62313 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.33□□□□□ -0.28
Lsm6P62313 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm6P62313 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.33□□□□□ -0.28
Lsm6P62313 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm6P62313 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm6P62313 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Lsm6P62313 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lsm6P62313 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm6P62313 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
Lsm6P62313 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.32□□□□□ -0.28
Lsm6P62313 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lsm6P62313 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lsm6P62313 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lsm6P62313 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lsm6P62313 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm6P62313 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.32□□□□□ -0.28
Lsm6P62313 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm6P62313 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm6P62313 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm6P62313 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm6P62313 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm6P62313 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.32□□□□□ -0.28
Lsm6P62313 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm6P62313 Gm7862-201ENSMUST00000121461 292 ntBASIC13.32□□□□□ -0.28
Lsm6P62313 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm6P62313 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.32□□□□□ -0.28
Lsm6P62313 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.32□□□□□ -0.28
Lsm6P62313 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.32□□□□□ -0.28
Lsm6P62313 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.32□□□□□ -0.28
Lsm6P62313 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Lsm6P62313 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm6P62313 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm6P62313 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm6P62313 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.32□□□□□ -0.28
Lsm6P62313 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm6P62313 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm6P62313 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm6P62313 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.31□□□□□ -0.28
Lsm6P62313 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lsm6P62313 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm6P62313 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm6P62313 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm6P62313 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm6P62313 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.31□□□□□ -0.28
Lsm6P62313 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms