Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.93□□□□□ -0.18
Lsm3P62311 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.93□□□□□ -0.18
Lsm3P62311 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Lsm3P62311 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.92□□□□□ -0.18
Lsm3P62311 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lsm3P62311 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Lsm3P62311 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.92□□□□□ -0.18
Lsm3P62311 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Lsm3P62311 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Lsm3P62311 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Lsm3P62311 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm3P62311 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Lsm3P62311 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lsm3P62311 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.91□□□□□ -0.18
Lsm3P62311 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.91□□□□□ -0.18
Lsm3P62311 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Lsm3P62311 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Lsm3P62311 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.91□□□□□ -0.18
Lsm3P62311 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Lsm3P62311 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm3P62311 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Lsm3P62311 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.9□□□□□ -0.18
Lsm3P62311 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Lsm3P62311 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Lsm3P62311 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Lsm3P62311 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.9□□□□□ -0.18
Lsm3P62311 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Lsm3P62311 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.9□□□□□ -0.18
Lsm3P62311 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Lsm3P62311 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Lsm3P62311 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm3P62311 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms