Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Gm14042-201ENSMUST00000120139 833 ntBASIC17.85■□□□□ 0.45
Lrch1P62046 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrch1P62046 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.85■□□□□ 0.45
Lrch1P62046 Gm18018-201ENSMUST00000198273 408 ntBASIC17.85■□□□□ 0.45
Lrch1P62046 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.85■□□□□ 0.45
Lrch1P62046 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lrch1P62046 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Lrch1P62046 Gm18062-201ENSMUST00000208020 547 ntBASIC17.85■□□□□ 0.45
Lrch1P62046 Gm18055-201ENSMUST00000208254 547 ntBASIC17.85■□□□□ 0.45
Lrch1P62046 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrch1P62046 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrch1P62046 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrch1P62046 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Lrch1P62046 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrch1P62046 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrch1P62046 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrch1P62046 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.84■□□□□ 0.45
Lrch1P62046 Gm22189-201ENSMUST00000103822 86 ntBASIC17.84■□□□□ 0.45
Lrch1P62046 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.84■□□□□ 0.45
Lrch1P62046 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Lrch1P62046 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Lrch1P62046 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lrch1P62046 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lrch1P62046 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrch1P62046 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrch1P62046 Gm9899-201ENSMUST00000065519 555 ntBASIC17.84■□□□□ 0.45
Lrch1P62046 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.84■□□□□ 0.45
Lrch1P62046 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Lrch1P62046 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrch1P62046 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrch1P62046 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrch1P62046 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrch1P62046 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lrch1P62046 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Lrch1P62046 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.83■□□□□ 0.45
Lrch1P62046 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lrch1P62046 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.83■□□□□ 0.45
Lrch1P62046 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lrch1P62046 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lrch1P62046 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrch1P62046 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrch1P62046 Gm45059-201ENSMUST00000205558 1077 ntBASIC17.83■□□□□ 0.44
Lrch1P62046 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.83■□□□□ 0.44
Lrch1P62046 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.83■□□□□ 0.44
Lrch1P62046 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrch1P62046 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrch1P62046 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrch1P62046 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrch1P62046 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrch1P62046 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrch1P62046 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Lrch1P62046 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Lrch1P62046 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Lrch1P62046 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Gm8602-201ENSMUST00000184045 607 ntBASIC17.82■□□□□ 0.44
Lrch1P62046 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.82■□□□□ 0.44
Lrch1P62046 Gm9908-201ENSMUST00000211534 448 ntBASIC17.82■□□□□ 0.44
Lrch1P62046 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.82■□□□□ 0.44
Lrch1P62046 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.82■□□□□ 0.44
Lrch1P62046 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.82■□□□□ 0.44
Lrch1P62046 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Lrch1P62046 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Lrch1P62046 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Lrch1P62046 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrch1P62046 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Lrch1P62046 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Lrch1P62046 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrch1P62046 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Lrch1P62046 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrch1P62046 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrch1P62046 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrch1P62046 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrch1P62046 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.81■□□□□ 0.44
Lrch1P62046 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.81■□□□□ 0.44
Lrch1P62046 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lrch1P62046 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lrch1P62046 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrch1P62046 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.81■□□□□ 0.44
Lrch1P62046 Gm13829-201ENSMUST00000119600 138 ntBASIC17.81■□□□□ 0.44
Lrch1P62046 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.81■□□□□ 0.44
Lrch1P62046 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lrch1P62046 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.81■□□□□ 0.44
Lrch1P62046 Gm45668-201ENSMUST00000211271 493 ntBASIC17.81■□□□□ 0.44
Lrch1P62046 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lrch1P62046 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrch1P62046 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms