Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC20.46■□□□□ 0.87
Nphp4P59240 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nphp4P59240 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nphp4P59240 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nphp4P59240 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nphp4P59240 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nphp4P59240 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nphp4P59240 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nphp4P59240 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nphp4P59240 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nphp4P59240 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nphp4P59240 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Nphp4P59240 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nphp4P59240 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nphp4P59240 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nphp4P59240 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
Nphp4P59240 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC20.45■□□□□ 0.86
Nphp4P59240 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nphp4P59240 Gm12151-201ENSMUST00000121374 290 ntBASIC20.45■□□□□ 0.86
Nphp4P59240 Gm27533-201ENSMUST00000183800 152 ntBASIC20.45■□□□□ 0.86
Nphp4P59240 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nphp4P59240 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC20.45■□□□□ 0.86
Nphp4P59240 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nphp4P59240 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nphp4P59240 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.45■□□□□ 0.86
Nphp4P59240 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nphp4P59240 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nphp4P59240 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Nphp4P59240 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nphp4P59240 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nphp4P59240 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC20.44■□□□□ 0.86
Nphp4P59240 Trav13-3-201ENSMUST00000117226 336 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nphp4P59240 Olfr286-202ENSMUST00000205305 969 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nphp4P59240 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nphp4P59240 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nphp4P59240 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC20.44■□□□□ 0.86
Nphp4P59240 Gm13127-201ENSMUST00000118978 1389 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nphp4P59240 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nphp4P59240 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nphp4P59240 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nphp4P59240 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nphp4P59240 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nphp4P59240 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nphp4P59240 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Nphp4P59240 Gm29310-201ENSMUST00000185468 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm21825-201ENSMUST00000185728 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm29109-201ENSMUST00000185895 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm21896-201ENSMUST00000186520 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm21873-201ENSMUST00000186728 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm21794-201ENSMUST00000187056 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm21880-201ENSMUST00000187275 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm21826-201ENSMUST00000187451 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm21198-201ENSMUST00000188393 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm21749-201ENSMUST00000189343 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm21901-201ENSMUST00000189568 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm29424-201ENSMUST00000189716 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm28599-201ENSMUST00000189838 694 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm21867-201ENSMUST00000189917 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm29269-201ENSMUST00000190087 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm21722-201ENSMUST00000190153 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm28423-201ENSMUST00000190701 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm21899-201ENSMUST00000190745 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm21910-201ENSMUST00000191163 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm21849-201ENSMUST00000191571 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm28678-201ENSMUST00000191593 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm20910-201ENSMUST00000193268 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm21871-201ENSMUST00000194621 696 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Gm45098-201ENSMUST00000207179 657 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Wdyhv1-203ENSMUST00000226889 394 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nphp4P59240 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nphp4P59240 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC20.44■□□□□ 0.86
Nphp4P59240 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nphp4P59240 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nphp4P59240 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nphp4P59240 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nphp4P59240 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC20.43■□□□□ 0.86
Nphp4P59240 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nphp4P59240 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC20.43■□□□□ 0.86
Nphp4P59240 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Nphp4P59240 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nphp4P59240 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nphp4P59240 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nphp4P59240 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nphp4P59240 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC20.43■□□□□ 0.86
Nphp4P59240 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nphp4P59240 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Nphp4P59240 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC20.43■□□□□ 0.86
Nphp4P59240 Gm9719-201ENSMUST00000162765 543 ntBASIC20.43■□□□□ 0.86
Nphp4P59240 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nphp4P59240 Gm6888-201ENSMUST00000221983 706 ntBASIC20.43■□□□□ 0.86
Nphp4P59240 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nphp4P59240 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nphp4P59240 Gm21009-201ENSMUST00000197169 1669 ntBASIC20.43■□□□□ 0.86
Nphp4P59240 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms