Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Abcd3P55096 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.62□□□□□ -0.23
Abcd3P55096 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Abcd3P55096 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Abcd3P55096 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.62□□□□□ -0.23
Abcd3P55096 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.62□□□□□ -0.23
Abcd3P55096 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.62□□□□□ -0.23
Abcd3P55096 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Rps4l-201ENSMUST00000071745 943 ntBASIC13.62□□□□□ -0.23
Abcd3P55096 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Abcd3P55096 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.62□□□□□ -0.23
Abcd3P55096 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd3P55096 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Abcd3P55096 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.61□□□□□ -0.23
Abcd3P55096 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Abcd3P55096 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Abcd3P55096 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.61□□□□□ -0.23
Abcd3P55096 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Abcd3P55096 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.61□□□□□ -0.23
Abcd3P55096 Gm18489-201ENSMUST00000172565 551 ntBASIC13.61□□□□□ -0.23
Abcd3P55096 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Gm10499-201ENSMUST00000174094 934 ntBASIC13.61□□□□□ -0.23
Abcd3P55096 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.61□□□□□ -0.23
Abcd3P55096 Gm37153-201ENSMUST00000193637 231 ntBASIC13.61□□□□□ -0.23
Abcd3P55096 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Abcd3P55096 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.61□□□□□ -0.23
Abcd3P55096 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Abcd3P55096 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Abcd3P55096 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Abcd3P55096 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd3P55096 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Abcd3P55096 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Abcd3P55096 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.6□□□□□ -0.23
Abcd3P55096 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.6□□□□□ -0.23
Abcd3P55096 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Abcd3P55096 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Gm6376-201ENSMUST00000209407 580 ntBASIC13.6□□□□□ -0.23
Abcd3P55096 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Abcd3P55096 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Abcd3P55096 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.6□□□□□ -0.23
Abcd3P55096 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Abcd3P55096 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd3P55096 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms