Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh6P54276 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC19.17■□□□□ 0.66
Msh6P54276 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.17■□□□□ 0.66
Msh6P54276 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Msh6P54276 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Msh6P54276 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh6P54276 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh6P54276 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh6P54276 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Msh6P54276 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.17■□□□□ 0.66
Msh6P54276 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh6P54276 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Msh6P54276 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.17■□□□□ 0.66
Msh6P54276 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Msh6P54276 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC19.17■□□□□ 0.66
Msh6P54276 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC19.17■□□□□ 0.66
Msh6P54276 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.17■□□□□ 0.66
Msh6P54276 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Msh6P54276 Hist1h2al-201ENSMUST00000091708 339 ntBASIC19.17■□□□□ 0.66
Msh6P54276 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.17■□□□□ 0.66
Msh6P54276 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh6P54276 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh6P54276 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Msh6P54276 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC19.16■□□□□ 0.66
Msh6P54276 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh6P54276 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh6P54276 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.16■□□□□ 0.66
Msh6P54276 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh6P54276 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Msh6P54276 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh6P54276 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC19.16■□□□□ 0.66
Msh6P54276 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh6P54276 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh6P54276 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh6P54276 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh6P54276 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Msh6P54276 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Msh6P54276 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.16■□□□□ 0.66
Msh6P54276 Gm27989-201ENSMUST00000184721 107 ntBASIC19.16■□□□□ 0.66
Msh6P54276 Gm43767-201ENSMUST00000198933 381 ntBASIC19.16■□□□□ 0.66
Msh6P54276 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh6P54276 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh6P54276 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Msh6P54276 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Msh6P54276 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh6P54276 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh6P54276 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh6P54276 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Msh6P54276 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Msh6P54276 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh6P54276 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh6P54276 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh6P54276 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh6P54276 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.15■□□□□ 0.66
Msh6P54276 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.15■□□□□ 0.66
Msh6P54276 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Msh6P54276 Gm13015-201ENSMUST00000118674 204 ntBASIC19.15■□□□□ 0.66
Msh6P54276 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC19.15■□□□□ 0.66
Msh6P54276 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh6P54276 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Msh6P54276 Gm17837-201ENSMUST00000186435 985 ntBASIC19.15■□□□□ 0.66
Msh6P54276 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Msh6P54276 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh6P54276 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Msh6P54276 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Msh6P54276 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh6P54276 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.15■□□□□ 0.66
Msh6P54276 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh6P54276 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Msh6P54276 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Msh6P54276 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Msh6P54276 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Msh6P54276 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Msh6P54276 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh6P54276 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh6P54276 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.14■□□□□ 0.65
Msh6P54276 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC19.14■□□□□ 0.65
Msh6P54276 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh6P54276 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.14■□□□□ 0.65
Msh6P54276 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh6P54276 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Msh6P54276 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Msh6P54276 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh6P54276 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh6P54276 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh6P54276 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.14■□□□□ 0.65
Msh6P54276 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Msh6P54276 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC19.13■□□□□ 0.65
Msh6P54276 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Msh6P54276 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Msh6P54276 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms