Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm23616-201ENSMUST00000177797 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm25871-201ENSMUST00000177816 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm24752-201ENSMUST00000178240 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm24496-201ENSMUST00000178287 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm25649-201ENSMUST00000178476 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm25548-201ENSMUST00000178681 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm23147-201ENSMUST00000178841 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm26095-201ENSMUST00000179270 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm22171-201ENSMUST00000179283 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm23936-201ENSMUST00000179354 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm22619-201ENSMUST00000179516 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm25255-201ENSMUST00000179579 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm24755-201ENSMUST00000179691 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm26506-201ENSMUST00000179692 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm25086-201ENSMUST00000179931 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm23243-201ENSMUST00000180047 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm24659-201ENSMUST00000180212 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm24169-201ENSMUST00000180244 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm23689-201ENSMUST00000180354 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm27359-201ENSMUST00000184153 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm27785-201ENSMUST00000184268 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm27466-201ENSMUST00000184396 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm27703-201ENSMUST00000184836 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.1■□□□□ 0.01
Atxn1P54254 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.1■□□□□ 0.01
Atxn1P54254 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.1■□□□□ 0.01
Atxn1P54254 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Atxn1P54254 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Atxn1P54254 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Atxn1P54254 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Atxn1P54254 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.09■□□□□ 0.01
Atxn1P54254 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Atxn1P54254 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Atxn1P54254 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.09■□□□□ 0.01
Atxn1P54254 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.09■□□□□ 0.01
Atxn1P54254 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Atxn1P54254 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.09■□□□□ 0.01
Atxn1P54254 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.09■□□□□ 0.01
Atxn1P54254 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Gm7653-201ENSMUST00000214567 508 ntBASIC15.09■□□□□ 0.01
Atxn1P54254 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Atxn1P54254 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Atxn1P54254 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.09■□□□□ 0.01
Atxn1P54254 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Atxn1P54254 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Atxn1P54254 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.09■□□□□ 0.01
Atxn1P54254 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atxn1P54254 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Atxn1P54254 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Atxn1P54254 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Atxn1P54254 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Atxn1P54254 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.08■□□□□ 0
Atxn1P54254 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atxn1P54254 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atxn1P54254 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atxn1P54254 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.08■□□□□ 0
Atxn1P54254 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.08■□□□□ 0
Atxn1P54254 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atxn1P54254 Thap2-203ENSMUST00000218989 527 ntBASIC15.08■□□□□ 0
Atxn1P54254 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.08■□□□□ 0
Atxn1P54254 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atxn1P54254 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atxn1P54254 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.08■□□□□ 0
Atxn1P54254 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Atxn1P54254 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atxn1P54254 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Atxn1P54254 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atxn1P54254 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Atxn1P54254 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms