Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sox1P53783 Mir1897-201ENSMUST00000122581 272 ntBASIC15.47■□□□□ 0.07
Sox1P53783 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.47■□□□□ 0.07
Sox1P53783 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox1P53783 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sox1P53783 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sox1P53783 Gm8318-201ENSMUST00000182954 872 ntBASIC15.47■□□□□ 0.07
Sox1P53783 Gm43179-201ENSMUST00000198797 275 ntBASIC15.47■□□□□ 0.07
Sox1P53783 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.47■□□□□ 0.07
Sox1P53783 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox1P53783 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox1P53783 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Sox1P53783 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox1P53783 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sox1P53783 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Sox1P53783 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Sox1P53783 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.46■□□□□ 0.07
Sox1P53783 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Sox1P53783 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.46■□□□□ 0.07
Sox1P53783 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.46■□□□□ 0.07
Sox1P53783 Gm9719-201ENSMUST00000162765 543 ntBASIC15.46■□□□□ 0.07
Sox1P53783 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.46■□□□□ 0.07
Sox1P53783 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.46■□□□□ 0.07
Sox1P53783 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.46■□□□□ 0.07
Sox1P53783 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Sox1P53783 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.46■□□□□ 0.07
Sox1P53783 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox1P53783 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sox1P53783 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sox1P53783 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sox1P53783 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
Sox1P53783 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox1P53783 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox1P53783 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox1P53783 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Sox1P53783 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox1P53783 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Sox1P53783 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sox1P53783 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sox1P53783 Gm12390-201ENSMUST00000117897 397 ntBASIC15.45■□□□□ 0.06
Sox1P53783 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.45■□□□□ 0.06
Sox1P53783 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.45■□□□□ 0.06
Sox1P53783 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.45■□□□□ 0.06
Sox1P53783 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.45■□□□□ 0.06
Sox1P53783 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox1P53783 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox1P53783 Gm46209-201ENSMUST00000217912 553 ntBASIC15.45■□□□□ 0.06
Sox1P53783 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.45■□□□□ 0.06
Sox1P53783 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox1P53783 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.45■□□□□ 0.06
Sox1P53783 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox1P53783 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox1P53783 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox1P53783 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.45■□□□□ 0.06
Sox1P53783 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.45■□□□□ 0.06
Sox1P53783 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sox1P53783 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sox1P53783 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox1P53783 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.44■□□□□ 0.06
Sox1P53783 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Sox1P53783 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Sox1P53783 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Sox1P53783 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.44■□□□□ 0.06
Sox1P53783 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 Gm17420-201ENSMUST00000164753 153 ntBASIC15.44■□□□□ 0.06
Sox1P53783 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.44■□□□□ 0.06
Sox1P53783 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.44■□□□□ 0.06
Sox1P53783 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Sox1P53783 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox1P53783 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms