Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccr4P51680 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccr4P51680 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccr4P51680 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccr4P51680 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccr4P51680 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccr4P51680 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccr4P51680 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccr4P51680 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccr4P51680 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccr4P51680 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccr4P51680 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccr4P51680 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccr4P51680 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccr4P51680 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.11□□□□□ -0.15
Ccr4P51680 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccr4P51680 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccr4P51680 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccr4P51680 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccr4P51680 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccr4P51680 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccr4P51680 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccr4P51680 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccr4P51680 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccr4P51680 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Ccr4P51680 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Ccr4P51680 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.1□□□□□ -0.15
Ccr4P51680 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.1□□□□□ -0.15
Ccr4P51680 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Ccr4P51680 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ccr4P51680 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccr4P51680 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ccr4P51680 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Ccr4P51680 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ccr4P51680 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccr4P51680 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccr4P51680 Gm43347-201ENSMUST00000200226 580 ntBASIC14.09□□□□□ -0.15
Ccr4P51680 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccr4P51680 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccr4P51680 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccr4P51680 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Ccr4P51680 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccr4P51680 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Ccr4P51680 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccr4P51680 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Ccr4P51680 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Ccr4P51680 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccr4P51680 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccr4P51680 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccr4P51680 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccr4P51680 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms