Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.64□□□□□ -0.39
Nkx2-1P50220 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkx2-1P50220 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nkx2-1P50220 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.63□□□□□ -0.39
Nkx2-1P50220 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Gm22697-201ENSMUST00000175194 63 ntBASIC12.63□□□□□ -0.39
Nkx2-1P50220 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.63□□□□□ -0.39
Nkx2-1P50220 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-1P50220 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Gm21559-201ENSMUST00000220638 855 ntBASIC12.62□□□□□ -0.39
Nkx2-1P50220 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Gm8587-201ENSMUST00000076538 843 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms