Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Ptx3P48759 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ptx3P48759 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.13□□□□□ -0.15
Ptx3P48759 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 Gm25911-201ENSMUST00000157621 56 ntBASIC14.13□□□□□ -0.15
Ptx3P48759 Gm43575-201ENSMUST00000196420 516 ntBASIC14.13□□□□□ -0.15
Ptx3P48759 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Ptx3P48759 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ptx3P48759 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Ptx3P48759 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.13□□□□□ -0.15
Ptx3P48759 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.13□□□□□ -0.15
Ptx3P48759 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptx3P48759 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.13□□□□□ -0.15
Ptx3P48759 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ptx3P48759 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.12□□□□□ -0.15
Ptx3P48759 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.12□□□□□ -0.15
Ptx3P48759 Gm4995-201ENSMUST00000117247 432 ntBASIC14.12□□□□□ -0.15
Ptx3P48759 Gm14822-201ENSMUST00000122247 291 ntBASIC14.12□□□□□ -0.15
Ptx3P48759 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ptx3P48759 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.12□□□□□ -0.15
Ptx3P48759 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.12□□□□□ -0.15
Ptx3P48759 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.12□□□□□ -0.15
Ptx3P48759 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ptx3P48759 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptx3P48759 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ptx3P48759 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ptx3P48759 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.11□□□□□ -0.15
Ptx3P48759 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Ptx3P48759 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.11□□□□□ -0.15
Ptx3P48759 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ptx3P48759 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.11□□□□□ -0.15
Ptx3P48759 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ptx3P48759 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Ptx3P48759 Gm27301-201ENSMUST00000184012 127 ntBASIC14.11□□□□□ -0.15
Ptx3P48759 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.11□□□□□ -0.15
Ptx3P48759 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ptx3P48759 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ptx3P48759 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptx3P48759 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptx3P48759 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptx3P48759 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptx3P48759 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ptx3P48759 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptx3P48759 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms