Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Brca1P48754 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.87■□□□□ 0.29
Brca1P48754 Gm9522-201ENSMUST00000182394 926 ntBASIC16.87■□□□□ 0.29
Brca1P48754 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.87■□□□□ 0.29
Brca1P48754 Gm16476-201ENSMUST00000221544 139 ntBASIC16.87■□□□□ 0.29
Brca1P48754 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Brca1P48754 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Brca1P48754 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Brca1P48754 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Brca1P48754 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Brca1P48754 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Brca1P48754 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.87■□□□□ 0.29
Brca1P48754 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Brca1P48754 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.87■□□□□ 0.29
Brca1P48754 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Brca1P48754 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Brca1P48754 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Brca1P48754 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.86■□□□□ 0.29
Brca1P48754 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.86■□□□□ 0.29
Brca1P48754 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Brca1P48754 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Brca1P48754 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.86■□□□□ 0.29
Brca1P48754 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Brca1P48754 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Brca1P48754 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Brca1P48754 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Brca1P48754 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.86■□□□□ 0.29
Brca1P48754 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Brca1P48754 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Brca1P48754 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Brca1P48754 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.86■□□□□ 0.29
Brca1P48754 Gm27631-201ENSMUST00000184163 466 ntBASIC16.86■□□□□ 0.29
Brca1P48754 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Brca1P48754 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.86■□□□□ 0.29
Brca1P48754 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.86■□□□□ 0.29
Brca1P48754 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Brca1P48754 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Brca1P48754 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.86■□□□□ 0.29
Brca1P48754 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Brca1P48754 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Brca1P48754 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brca1P48754 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brca1P48754 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brca1P48754 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.85■□□□□ 0.29
Brca1P48754 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brca1P48754 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Brca1P48754 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.85■□□□□ 0.29
Brca1P48754 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brca1P48754 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brca1P48754 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brca1P48754 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brca1P48754 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Brca1P48754 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brca1P48754 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Brca1P48754 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Brca1P48754 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brca1P48754 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Brca1P48754 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.84■□□□□ 0.29
Brca1P48754 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.84■□□□□ 0.29
Brca1P48754 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Brca1P48754 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Brca1P48754 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.84■□□□□ 0.29
Brca1P48754 Gm15824-201ENSMUST00000119516 955 ntBASIC16.84■□□□□ 0.29
Brca1P48754 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.84■□□□□ 0.29
Brca1P48754 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Brca1P48754 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.84■□□□□ 0.29
Brca1P48754 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
Brca1P48754 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Brca1P48754 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brca1P48754 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Brca1P48754 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Brca1P48754 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
Brca1P48754 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Brca1P48754 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Brca1P48754 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Brca1P48754 Gm37917-201ENSMUST00000194711 392 ntBASIC16.83■□□□□ 0.28
Brca1P48754 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brca1P48754 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brca1P48754 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Brca1P48754 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.83■□□□□ 0.28
Brca1P48754 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Brca1P48754 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Brca1P48754 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brca1P48754 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms