Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.01■□□□□ 0.15
HttP42859 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HttP42859 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HttP42859 Gm8801-201ENSMUST00000173255 1064 ntBASIC16.01■□□□□ 0.15
HttP42859 Mir7070-201ENSMUST00000183657 86 ntBASIC16.01■□□□□ 0.15
HttP42859 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HttP42859 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HttP42859 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.01■□□□□ 0.15
HttP42859 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.01■□□□□ 0.15
HttP42859 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HttP42859 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16■□□□□ 0.15
HttP42859 Gm18222-201ENSMUST00000202416 1387 ntBASIC16■□□□□ 0.15
HttP42859 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HttP42859 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HttP42859 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16■□□□□ 0.15
HttP42859 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HttP42859 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16■□□□□ 0.15
HttP42859 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16■□□□□ 0.15
HttP42859 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
HttP42859 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16■□□□□ 0.15
HttP42859 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HttP42859 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HttP42859 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HttP42859 Gm27631-201ENSMUST00000184163 466 ntBASIC16■□□□□ 0.15
HttP42859 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
HttP42859 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HttP42859 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
HttP42859 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HttP42859 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16■□□□□ 0.15
HttP42859 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HttP42859 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HttP42859 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HttP42859 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HttP42859 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.99■□□□□ 0.15
HttP42859 Gm16570-201ENSMUST00000161951 436 ntBASIC15.99■□□□□ 0.15
HttP42859 Gm27731-201ENSMUST00000185192 107 ntBASIC15.99■□□□□ 0.15
HttP42859 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HttP42859 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.99■□□□□ 0.15
HttP42859 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.99■□□□□ 0.15
HttP42859 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HttP42859 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HttP42859 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.99■□□□□ 0.15
HttP42859 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HttP42859 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.99■□□□□ 0.15
HttP42859 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HttP42859 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.99■□□□□ 0.15
HttP42859 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.99■□□□□ 0.15
HttP42859 Gm14723-201ENSMUST00000118686 215 ntBASIC15.99■□□□□ 0.15
HttP42859 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HttP42859 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.99■□□□□ 0.15
HttP42859 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HttP42859 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HttP42859 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HttP42859 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HttP42859 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HttP42859 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HttP42859 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HttP42859 Gm37466-201ENSMUST00000195692 652 ntBASIC15.99■□□□□ 0.15
HttP42859 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HttP42859 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HttP42859 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
HttP42859 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HttP42859 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HttP42859 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HttP42859 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HttP42859 Gm27572-201ENSMUST00000183702 255 ntBASIC15.98■□□□□ 0.15
HttP42859 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.98■□□□□ 0.15
HttP42859 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HttP42859 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HttP42859 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HttP42859 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
HttP42859 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HttP42859 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HttP42859 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HttP42859 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HttP42859 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HttP42859 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HttP42859 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.98■□□□□ 0.15
HttP42859 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.97■□□□□ 0.15
HttP42859 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.97■□□□□ 0.15
HttP42859 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.97■□□□□ 0.15
HttP42859 Gm18056-201ENSMUST00000207670 568 ntBASIC15.97■□□□□ 0.15
HttP42859 Gm18061-201ENSMUST00000208350 562 ntBASIC15.97■□□□□ 0.15
HttP42859 Gm18063-201ENSMUST00000208529 568 ntBASIC15.97■□□□□ 0.15
HttP42859 Gm18052-201ENSMUST00000208750 559 ntBASIC15.97■□□□□ 0.15
HttP42859 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.97■□□□□ 0.15
HttP42859 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.97■□□□□ 0.15
HttP42859 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms