Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Gm18246-201ENSMUST00000221023 728 ntBASIC13.94□□□□□ -0.18
Nkx2-2P42586 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.93□□□□□ -0.18
Nkx2-2P42586 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Nkx2-2P42586 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.93□□□□□ -0.18
Nkx2-2P42586 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.93□□□□□ -0.18
Nkx2-2P42586 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Gm7461-201ENSMUST00000058918 827 ntBASIC13.93□□□□□ -0.18
Nkx2-2P42586 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-2P42586 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Gm43767-201ENSMUST00000198933 381 ntBASIC13.92□□□□□ -0.18
Nkx2-2P42586 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-2P42586 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms