Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.82□□□□□ -0.36
Mmp9P41245 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.82□□□□□ -0.36
Mmp9P41245 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp9P41245 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp9P41245 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp9P41245 Gm18032-201ENSMUST00000222541 538 ntBASIC12.82□□□□□ -0.36
Mmp9P41245 Gm7461-201ENSMUST00000058918 827 ntBASIC12.82□□□□□ -0.36
Mmp9P41245 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp9P41245 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Mmp9P41245 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.82□□□□□ -0.36
Mmp9P41245 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp9P41245 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp9P41245 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Mmp9P41245 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp9P41245 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp9P41245 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp9P41245 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.82□□□□□ -0.36
Mmp9P41245 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp9P41245 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp9P41245 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.82□□□□□ -0.36
Mmp9P41245 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp9P41245 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp9P41245 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp9P41245 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Mmp9P41245 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Mmp9P41245 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Mmp9P41245 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Mmp9P41245 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Mmp9P41245 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Gm11336-201ENSMUST00000118168 334 ntBASIC12.81□□□□□ -0.36
Mmp9P41245 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.81□□□□□ -0.36
Mmp9P41245 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Mmp9P41245 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Mmp9P41245 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Mmp9P41245 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.8□□□□□ -0.36
Mmp9P41245 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.8□□□□□ -0.36
Mmp9P41245 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Gm7284-201ENSMUST00000131667 944 ntBASIC12.8□□□□□ -0.36
Mmp9P41245 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Mmp9P41245 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.8□□□□□ -0.36
Mmp9P41245 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Mmp9P41245 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.8□□□□□ -0.36
Mmp9P41245 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Mmp9P41245 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Mmp9P41245 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp9P41245 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Mmp9P41245 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Mmp9P41245 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp9P41245 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp9P41245 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp9P41245 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms