Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Abca1P41233 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Abca1P41233 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Abca1P41233 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Abca1P41233 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Abca1P41233 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Abca1P41233 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Abca1P41233 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.67□□□□□ -0.38
Abca1P41233 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.67□□□□□ -0.38
Abca1P41233 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.67□□□□□ -0.38
Abca1P41233 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Abca1P41233 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Abca1P41233 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Abca1P41233 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.67□□□□□ -0.38
Abca1P41233 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.67□□□□□ -0.38
Abca1P41233 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Abca1P41233 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Abca1P41233 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Abca1P41233 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Abca1P41233 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Abca1P41233 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Abca1P41233 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Abca1P41233 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Abca1P41233 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.66□□□□□ -0.38
Abca1P41233 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Abca1P41233 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Abca1P41233 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Abca1P41233 Gm11745-201ENSMUST00000121669 448 ntBASIC12.66□□□□□ -0.38
Abca1P41233 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Abca1P41233 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.66□□□□□ -0.38
Abca1P41233 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Abca1P41233 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Abca1P41233 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.66□□□□□ -0.38
Abca1P41233 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.66□□□□□ -0.38
Abca1P41233 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Abca1P41233 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Abca1P41233 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.66□□□□□ -0.38
Abca1P41233 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Abca1P41233 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Abca1P41233 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Abca1P41233 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Abca1P41233 Mir449b-201ENSMUST00000104833 80 ntBASIC12.65□□□□□ -0.38
Abca1P41233 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.65□□□□□ -0.38
Abca1P41233 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.65□□□□□ -0.38
Abca1P41233 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.65□□□□□ -0.38
Abca1P41233 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Abca1P41233 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Abca1P41233 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Abca1P41233 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Abca1P41233 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.65□□□□□ -0.38
Abca1P41233 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.65□□□□□ -0.38
Abca1P41233 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Abca1P41233 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Abca1P41233 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Abca1P41233 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Abca1P41233 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Abca1P41233 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Abca1P41233 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Abca1P41233 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Abca1P41233 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Abca1P41233 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Abca1P41233 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Abca1P41233 Gm43474-201ENSMUST00000196415 774 ntBASIC12.64□□□□□ -0.39
Abca1P41233 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.64□□□□□ -0.39
Abca1P41233 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.64□□□□□ -0.39
Abca1P41233 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Abca1P41233 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Abca1P41233 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Abca1P41233 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Abca1P41233 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Abca1P41233 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Abca1P41233 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Abca1P41233 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Abca1P41233 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Abca1P41233 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Abca1P41233 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Abca1P41233 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.64□□□□□ -0.39
Abca1P41233 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.64□□□□□ -0.39
Abca1P41233 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Abca1P41233 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms