Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Sox6P40645 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Sox6P40645 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.32□□□□□ -0.12
Sox6P40645 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sox6P40645 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sox6P40645 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox6P40645 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sox6P40645 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.31□□□□□ -0.12
Sox6P40645 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Sox6P40645 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Sox6P40645 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Sox6P40645 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox6P40645 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.31□□□□□ -0.12
Sox6P40645 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.31□□□□□ -0.12
Sox6P40645 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox6P40645 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sox6P40645 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sox6P40645 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Sox6P40645 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Sox6P40645 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sox6P40645 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox6P40645 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox6P40645 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox6P40645 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sox6P40645 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Sox6P40645 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sox6P40645 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sox6P40645 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.3□□□□□ -0.12
Sox6P40645 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.3□□□□□ -0.12
Sox6P40645 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Gm10819-201ENSMUST00000099988 561 ntBASIC14.3□□□□□ -0.12
Sox6P40645 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox6P40645 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sox6P40645 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.3□□□□□ -0.12
Sox6P40645 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.3□□□□□ -0.12
Sox6P40645 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox6P40645 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.29□□□□□ -0.12
Sox6P40645 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox6P40645 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms