Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LdlrP35951 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LdlrP35951 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
LdlrP35951 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LdlrP35951 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LdlrP35951 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
LdlrP35951 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LdlrP35951 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.12■□□□□ 0.01
LdlrP35951 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.12■□□□□ 0.01
LdlrP35951 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.12■□□□□ 0.01
LdlrP35951 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LdlrP35951 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.12■□□□□ 0.01
LdlrP35951 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.12■□□□□ 0.01
LdlrP35951 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.12■□□□□ 0.01
LdlrP35951 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LdlrP35951 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.12■□□□□ 0.01
LdlrP35951 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
LdlrP35951 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LdlrP35951 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
LdlrP35951 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LdlrP35951 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.11■□□□□ 0.01
LdlrP35951 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Gm1401-201ENSMUST00000122048 772 ntBASIC15.11■□□□□ 0.01
LdlrP35951 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.11■□□□□ 0.01
LdlrP35951 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LdlrP35951 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.11■□□□□ 0.01
LdlrP35951 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.11■□□□□ 0.01
LdlrP35951 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
LdlrP35951 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
LdlrP35951 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LdlrP35951 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LdlrP35951 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
LdlrP35951 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LdlrP35951 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.1■□□□□ 0.01
LdlrP35951 Gm14722-201ENSMUST00000118943 689 ntBASIC15.1■□□□□ 0.01
LdlrP35951 Gm13312-201ENSMUST00000119631 718 ntBASIC15.1■□□□□ 0.01
LdlrP35951 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Gm7862-201ENSMUST00000121461 292 ntBASIC15.1■□□□□ 0.01
LdlrP35951 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.1■□□□□ 0.01
LdlrP35951 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LdlrP35951 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms