Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sftpa1P35242 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sftpa1P35242 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.02□□□□□ -0.16
Sftpa1P35242 Syt7-205ENSMUST00000224135 1557 ntBASIC14.02□□□□□ -0.16
Sftpa1P35242 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sftpa1P35242 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sftpa1P35242 Gm16215-201ENSMUST00000161990 637 ntBASIC14.02□□□□□ -0.17
Sftpa1P35242 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sftpa1P35242 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.02□□□□□ -0.17
Sftpa1P35242 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sftpa1P35242 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.02□□□□□ -0.17
Sftpa1P35242 Gm44855-201ENSMUST00000205725 362 ntBASIC14.02□□□□□ -0.17
Sftpa1P35242 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sftpa1P35242 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.02□□□□□ -0.17
Sftpa1P35242 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.02□□□□□ -0.17
Sftpa1P35242 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sftpa1P35242 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Sftpa1P35242 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sftpa1P35242 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sftpa1P35242 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sftpa1P35242 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sftpa1P35242 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sftpa1P35242 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sftpa1P35242 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.01□□□□□ -0.17
Sftpa1P35242 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sftpa1P35242 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 Gm7488-201ENSMUST00000117148 684 ntBASIC14.01□□□□□ -0.17
Sftpa1P35242 Gm15487-201ENSMUST00000122373 465 ntBASIC14.01□□□□□ -0.17
Sftpa1P35242 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sftpa1P35242 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.01□□□□□ -0.17
Sftpa1P35242 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.01□□□□□ -0.17
Sftpa1P35242 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.01□□□□□ -0.17
Sftpa1P35242 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.01□□□□□ -0.17
Sftpa1P35242 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Sftpa1P35242 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.01□□□□□ -0.17
Sftpa1P35242 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.01□□□□□ -0.17
Sftpa1P35242 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sftpa1P35242 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.01□□□□□ -0.17
Sftpa1P35242 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sftpa1P35242 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sftpa1P35242 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Sftpa1P35242 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sftpa1P35242 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sftpa1P35242 Gm14722-201ENSMUST00000118943 689 ntBASIC14□□□□□ -0.17
Sftpa1P35242 Gm16026-204ENSMUST00000162652 683 ntBASIC14□□□□□ -0.17
Sftpa1P35242 Gm18737-201ENSMUST00000173594 937 ntBASIC14□□□□□ -0.17
Sftpa1P35242 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sftpa1P35242 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sftpa1P35242 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sftpa1P35242 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sftpa1P35242 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Sftpa1P35242 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.99□□□□□ -0.17
Sftpa1P35242 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sftpa1P35242 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sftpa1P35242 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sftpa1P35242 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sftpa1P35242 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sftpa1P35242 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sftpa1P35242 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.99□□□□□ -0.17
Sftpa1P35242 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sftpa1P35242 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sftpa1P35242 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sftpa1P35242 Gm28630-201ENSMUST00000187806 498 ntBASIC13.99□□□□□ -0.17
Sftpa1P35242 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sftpa1P35242 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sftpa1P35242 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sftpa1P35242 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.99□□□□□ -0.17
Sftpa1P35242 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms