Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.05□□□□□ -0.48
Rom1P32958 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.05□□□□□ -0.48
Rom1P32958 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Rom1P32958 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rom1P32958 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rom1P32958 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Rom1P32958 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rom1P32958 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.05□□□□□ -0.48
Rom1P32958 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Rom1P32958 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rom1P32958 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rom1P32958 Gm23547-201ENSMUST00000158210 271 ntBASIC12.04□□□□□ -0.48
Rom1P32958 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rom1P32958 Gm37722-201ENSMUST00000193757 208 ntBASIC12.04□□□□□ -0.48
Rom1P32958 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.04□□□□□ -0.48
Rom1P32958 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.04□□□□□ -0.48
Rom1P32958 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.04□□□□□ -0.48
Rom1P32958 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.04□□□□□ -0.48
Rom1P32958 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.04□□□□□ -0.48
Rom1P32958 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rom1P32958 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rom1P32958 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rom1P32958 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.03□□□□□ -0.48
Rom1P32958 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.03□□□□□ -0.48
Rom1P32958 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rom1P32958 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
Rom1P32958 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Gm12008-201ENSMUST00000117791 755 ntBASIC12.03□□□□□ -0.48
Rom1P32958 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.03□□□□□ -0.48
Rom1P32958 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.03□□□□□ -0.48
Rom1P32958 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rom1P32958 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rom1P32958 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms