Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PdgfbP31240 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PdgfbP31240 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PdgfbP31240 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.15■□□□□ 0.02
PdgfbP31240 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PdgfbP31240 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.15■□□□□ 0.02
PdgfbP31240 Mir1897-201ENSMUST00000122581 272 ntBASIC15.15■□□□□ 0.02
PdgfbP31240 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PdgfbP31240 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PdgfbP31240 Gm18018-201ENSMUST00000198273 408 ntBASIC15.15■□□□□ 0.02
PdgfbP31240 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PdgfbP31240 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PdgfbP31240 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PdgfbP31240 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PdgfbP31240 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PdgfbP31240 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PdgfbP31240 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.15■□□□□ 0.02
PdgfbP31240 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PdgfbP31240 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.14■□□□□ 0.01
PdgfbP31240 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PdgfbP31240 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.14■□□□□ 0.01
PdgfbP31240 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PdgfbP31240 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PdgfbP31240 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.14■□□□□ 0.01
PdgfbP31240 Gm43703-201ENSMUST00000200523 763 ntBASIC15.14■□□□□ 0.01
PdgfbP31240 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PdgfbP31240 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.14■□□□□ 0.01
PdgfbP31240 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.14■□□□□ 0.01
PdgfbP31240 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PdgfbP31240 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PdgfbP31240 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PdgfbP31240 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.13■□□□□ 0.01
PdgfbP31240 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.13■□□□□ 0.01
PdgfbP31240 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Gm22189-201ENSMUST00000103822 86 ntBASIC15.13■□□□□ 0.01
PdgfbP31240 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Gm13829-201ENSMUST00000119600 138 ntBASIC15.13■□□□□ 0.01
PdgfbP31240 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.13■□□□□ 0.01
PdgfbP31240 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.13■□□□□ 0.01
PdgfbP31240 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.13■□□□□ 0.01
PdgfbP31240 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.13■□□□□ 0.01
PdgfbP31240 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.13■□□□□ 0.01
PdgfbP31240 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Gm20445-201ENSMUST00000061905 565 ntBASIC15.13■□□□□ 0.01
PdgfbP31240 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PdgfbP31240 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PdgfbP31240 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PdgfbP31240 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.12■□□□□ 0.01
PdgfbP31240 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PdgfbP31240 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PdgfbP31240 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.12■□□□□ 0.01
PdgfbP31240 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PdgfbP31240 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PdgfbP31240 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PdgfbP31240 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PdgfbP31240 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PdgfbP31240 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.12■□□□□ 0.01
PdgfbP31240 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.12■□□□□ 0.01
PdgfbP31240 Gm18062-201ENSMUST00000208020 547 ntBASIC15.12■□□□□ 0.01
PdgfbP31240 Gm18055-201ENSMUST00000208254 547 ntBASIC15.12■□□□□ 0.01
PdgfbP31240 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.12■□□□□ 0.01
PdgfbP31240 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PdgfbP31240 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PdgfbP31240 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms