Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CenpbP27790 Gm11839-201ENSMUST00000120647 1953 ntBASIC20.53■□□□□ 0.88
CenpbP27790 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CenpbP27790 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CenpbP27790 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CenpbP27790 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CenpbP27790 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CenpbP27790 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CenpbP27790 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CenpbP27790 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CenpbP27790 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CenpbP27790 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CenpbP27790 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CenpbP27790 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 Mir1199-201ENSMUST00000117015 119 ntBASIC20.52■□□□□ 0.88
CenpbP27790 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.52■□□□□ 0.88
CenpbP27790 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.52■□□□□ 0.88
CenpbP27790 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.52■□□□□ 0.88
CenpbP27790 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CenpbP27790 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CenpbP27790 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.51■□□□□ 0.87
CenpbP27790 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CenpbP27790 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CenpbP27790 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.51■□□□□ 0.87
CenpbP27790 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CenpbP27790 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CenpbP27790 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CenpbP27790 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CenpbP27790 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CenpbP27790 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CenpbP27790 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CenpbP27790 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CenpbP27790 Ksr1-207ENSMUST00000226282 5260 ntBASIC20.5■□□□□ 0.87
CenpbP27790 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CenpbP27790 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CenpbP27790 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CenpbP27790 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.5■□□□□ 0.87
CenpbP27790 Gm11643-201ENSMUST00000119578 864 ntBASIC20.5■□□□□ 0.87
CenpbP27790 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.5■□□□□ 0.87
CenpbP27790 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.5■□□□□ 0.87
CenpbP27790 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CenpbP27790 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CenpbP27790 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CenpbP27790 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CenpbP27790 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CenpbP27790 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CenpbP27790 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CenpbP27790 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CenpbP27790 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CenpbP27790 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CenpbP27790 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.49■□□□□ 0.87
CenpbP27790 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CenpbP27790 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CenpbP27790 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CenpbP27790 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC20.49■□□□□ 0.87
CenpbP27790 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.49■□□□□ 0.87
CenpbP27790 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CenpbP27790 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CenpbP27790 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CenpbP27790 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CenpbP27790 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CenpbP27790 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CenpbP27790 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.49■□□□□ 0.87
CenpbP27790 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.49■□□□□ 0.87
CenpbP27790 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CenpbP27790 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CenpbP27790 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CenpbP27790 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CenpbP27790 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CenpbP27790 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CenpbP27790 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms