Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccl6P27784 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.89□□□□□ -0.51
Ccl6P27784 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Gm19164-201ENSMUST00000210667 640 ntBASIC11.89□□□□□ -0.51
Ccl6P27784 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.89□□□□□ -0.51
Ccl6P27784 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ccl6P27784 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccl6P27784 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ccl6P27784 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccl6P27784 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
Ccl6P27784 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Ccl6P27784 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccl6P27784 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 Gm44357-201ENSMUST00000195897 142 ntBASIC11.88□□□□□ -0.51
Ccl6P27784 Gm19658-201ENSMUST00000196231 138 ntBASIC11.88□□□□□ -0.51
Ccl6P27784 Gm44367-201ENSMUST00000196836 138 ntBASIC11.88□□□□□ -0.51
Ccl6P27784 Gm44350-201ENSMUST00000197197 138 ntBASIC11.88□□□□□ -0.51
Ccl6P27784 Gm44390-201ENSMUST00000197533 144 ntBASIC11.88□□□□□ -0.51
Ccl6P27784 Gm44313-201ENSMUST00000198018 138 ntBASIC11.88□□□□□ -0.51
Ccl6P27784 Gm44486-201ENSMUST00000198508 138 ntBASIC11.88□□□□□ -0.51
Ccl6P27784 Gm44314-201ENSMUST00000199263 138 ntBASIC11.88□□□□□ -0.51
Ccl6P27784 Gm44394-201ENSMUST00000199558 138 ntBASIC11.88□□□□□ -0.51
Ccl6P27784 Gm44484-201ENSMUST00000199873 138 ntBASIC11.88□□□□□ -0.51
Ccl6P27784 Gm44466-201ENSMUST00000200264 138 ntBASIC11.88□□□□□ -0.51
Ccl6P27784 Gm44359-201ENSMUST00000200671 138 ntBASIC11.88□□□□□ -0.51
Ccl6P27784 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccl6P27784 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccl6P27784 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccl6P27784 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Ccl6P27784 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccl6P27784 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccl6P27784 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccl6P27784 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ccl6P27784 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.87□□□□□ -0.51
Ccl6P27784 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Ccl6P27784 Gm8344-201ENSMUST00000119813 856 ntBASIC11.87□□□□□ -0.51
Ccl6P27784 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Gm27459-201ENSMUST00000184860 107 ntBASIC11.87□□□□□ -0.51
Ccl6P27784 Gm17971-201ENSMUST00000190239 806 ntBASIC11.87□□□□□ -0.51
Ccl6P27784 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.87□□□□□ -0.51
Ccl6P27784 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.87□□□□□ -0.51
Ccl6P27784 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.87□□□□□ -0.51
Ccl6P27784 Birc2-201ENSMUST00000054878 378 ntBASIC11.87□□□□□ -0.51
Ccl6P27784 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.87□□□□□ -0.51
Ccl6P27784 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ccl6P27784 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccl6P27784 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccl6P27784 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ccl6P27784 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl6P27784 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.86□□□□□ -0.51
Ccl6P27784 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms