Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Cbx3P23198 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cbx3P23198 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cbx3P23198 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cbx3P23198 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cbx3P23198 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cbx3P23198 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cbx3P23198 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cbx3P23198 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cbx3P23198 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Cbx3P23198 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.88□□□□□ -0.19
Cbx3P23198 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cbx3P23198 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Cbx3P23198 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cbx3P23198 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.88□□□□□ -0.19
Cbx3P23198 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.88□□□□□ -0.19
Cbx3P23198 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cbx3P23198 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Cbx3P23198 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cbx3P23198 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.87□□□□□ -0.19
Cbx3P23198 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.87□□□□□ -0.19
Cbx3P23198 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.87□□□□□ -0.19
Cbx3P23198 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Cbx3P23198 Gm17661-201ENSMUST00000170317 270 ntBASIC13.87□□□□□ -0.19
Cbx3P23198 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.87□□□□□ -0.19
Cbx3P23198 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.87□□□□□ -0.19
Cbx3P23198 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cbx3P23198 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cbx3P23198 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.86□□□□□ -0.19
Cbx3P23198 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.86□□□□□ -0.19
Cbx3P23198 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.86□□□□□ -0.19
Cbx3P23198 Gm12527-201ENSMUST00000117967 564 ntBASIC13.86□□□□□ -0.19
Cbx3P23198 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Cbx3P23198 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cbx3P23198 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms