Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RarbP22605 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RarbP22605 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.82■□□□□ 0.28
RarbP22605 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.82■□□□□ 0.28
RarbP22605 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.82■□□□□ 0.28
RarbP22605 Gm15693-201ENSMUST00000120470 637 ntBASIC16.82■□□□□ 0.28
RarbP22605 Gm12151-201ENSMUST00000121374 290 ntBASIC16.82■□□□□ 0.28
RarbP22605 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RarbP22605 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.82■□□□□ 0.28
RarbP22605 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.82■□□□□ 0.28
RarbP22605 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RarbP22605 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RarbP22605 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RarbP22605 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RarbP22605 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RarbP22605 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RarbP22605 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RarbP22605 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.81■□□□□ 0.28
RarbP22605 Gm6415-201ENSMUST00000118488 348 ntBASIC16.81■□□□□ 0.28
RarbP22605 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.81■□□□□ 0.28
RarbP22605 Gm13223-201ENSMUST00000118609 747 ntBASIC16.81■□□□□ 0.28
RarbP22605 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.81■□□□□ 0.28
RarbP22605 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.81■□□□□ 0.28
RarbP22605 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RarbP22605 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RarbP22605 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RarbP22605 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.81■□□□□ 0.28
RarbP22605 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.8■□□□□ 0.28
RarbP22605 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.8■□□□□ 0.28
RarbP22605 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RarbP22605 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RarbP22605 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RarbP22605 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RarbP22605 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RarbP22605 Gm2810-201ENSMUST00000118681 990 ntBASIC16.8■□□□□ 0.28
RarbP22605 Gm9824-201ENSMUST00000178707 561 ntBASIC16.8■□□□□ 0.28
RarbP22605 Gm27618-201ENSMUST00000183671 60 ntBASIC16.8■□□□□ 0.28
RarbP22605 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RarbP22605 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.8■□□□□ 0.28
RarbP22605 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.8■□□□□ 0.28
RarbP22605 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RarbP22605 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RarbP22605 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RarbP22605 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RarbP22605 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RarbP22605 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RarbP22605 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RarbP22605 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RarbP22605 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RarbP22605 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RarbP22605 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
RarbP22605 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RarbP22605 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.79■□□□□ 0.28
RarbP22605 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RarbP22605 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Gm17837-201ENSMUST00000186435 985 ntBASIC16.79■□□□□ 0.28
RarbP22605 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RarbP22605 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.79■□□□□ 0.28
RarbP22605 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.79■□□□□ 0.28
RarbP22605 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RarbP22605 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RarbP22605 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RarbP22605 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RarbP22605 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RarbP22605 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RarbP22605 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms