Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.36□□□□□ -0.11
TP20293 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TP20293 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.35□□□□□ -0.11
TP20293 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.35□□□□□ -0.11
TP20293 Gm13418-201ENSMUST00000119097 944 ntBASIC14.35□□□□□ -0.11
TP20293 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.35□□□□□ -0.11
TP20293 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.35□□□□□ -0.11
TP20293 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.35□□□□□ -0.11
TP20293 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.35□□□□□ -0.11
TP20293 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.35□□□□□ -0.11
TP20293 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TP20293 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.35□□□□□ -0.11
TP20293 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.35□□□□□ -0.11
TP20293 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TP20293 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.34□□□□□ -0.11
TP20293 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TP20293 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.34□□□□□ -0.11
TP20293 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.34□□□□□ -0.11
TP20293 Gm25990-201ENSMUST00000102440 86 ntBASIC14.34□□□□□ -0.11
TP20293 Gm7862-201ENSMUST00000121461 292 ntBASIC14.34□□□□□ -0.11
TP20293 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.34□□□□□ -0.11
TP20293 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TP20293 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TP20293 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.34□□□□□ -0.11
TP20293 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TP20293 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TP20293 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TP20293 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TP20293 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TP20293 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.33□□□□□ -0.12
TP20293 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 Gm13884-201ENSMUST00000118103 829 ntBASIC14.33□□□□□ -0.12
TP20293 Gm15358-201ENSMUST00000119249 520 ntBASIC14.33□□□□□ -0.12
TP20293 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TP20293 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.33□□□□□ -0.12
TP20293 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.33□□□□□ -0.12
TP20293 Gm5864-201ENSMUST00000202263 970 ntBASIC14.33□□□□□ -0.12
TP20293 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.33□□□□□ -0.12
TP20293 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.33□□□□□ -0.12
TP20293 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
TP20293 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TP20293 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TP20293 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TP20293 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TP20293 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms