Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Hmgn1P18608 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.94□□□□□ -0.18
Hmgn1P18608 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmgn1P18608 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Hmgn1P18608 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.93□□□□□ -0.18
Hmgn1P18608 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.93□□□□□ -0.18
Hmgn1P18608 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgn1P18608 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgn1P18608 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgn1P18608 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hmgn1P18608 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgn1P18608 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgn1P18608 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.93□□□□□ -0.18
Hmgn1P18608 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hmgn1P18608 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Hmgn1P18608 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.93□□□□□ -0.18
Hmgn1P18608 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hmgn1P18608 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.93□□□□□ -0.18
Hmgn1P18608 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.93□□□□□ -0.18
Hmgn1P18608 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.93□□□□□ -0.18
Hmgn1P18608 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgn1P18608 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hmgn1P18608 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgn1P18608 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hmgn1P18608 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgn1P18608 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgn1P18608 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Hmgn1P18608 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmgn1P18608 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.93□□□□□ -0.18
Hmgn1P18608 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.93□□□□□ -0.18
Hmgn1P18608 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Hmgn1P18608 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hmgn1P18608 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.92□□□□□ -0.18
Hmgn1P18608 Gm11950-201ENSMUST00000121615 838 ntBASIC13.92□□□□□ -0.18
Hmgn1P18608 Rprl3-201ENSMUST00000157400 290 ntBASIC13.92□□□□□ -0.18
Hmgn1P18608 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Hmgn1P18608 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.92□□□□□ -0.18
Hmgn1P18608 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.92□□□□□ -0.18
Hmgn1P18608 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.92□□□□□ -0.18
Hmgn1P18608 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.92□□□□□ -0.18
Hmgn1P18608 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hmgn1P18608 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hmgn1P18608 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.91□□□□□ -0.18
Hmgn1P18608 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.91□□□□□ -0.18
Hmgn1P18608 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.91□□□□□ -0.18
Hmgn1P18608 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.91□□□□□ -0.18
Hmgn1P18608 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.91□□□□□ -0.18
Hmgn1P18608 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Hmgn1P18608 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.91□□□□□ -0.18
Hmgn1P18608 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hmgn1P18608 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.91□□□□□ -0.18
Hmgn1P18608 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hmgn1P18608 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.91□□□□□ -0.18
Hmgn1P18608 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.91□□□□□ -0.18
Hmgn1P18608 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.91□□□□□ -0.18
Hmgn1P18608 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Hmgn1P18608 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Hmgn1P18608 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Hmgn1P18608 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hmgn1P18608 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms