Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Cntn1P12960 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.59□□□□□ -0.07
Cntn1P12960 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.59□□□□□ -0.07
Cntn1P12960 Gm44492-201ENSMUST00000197012 141 ntBASIC14.59□□□□□ -0.07
Cntn1P12960 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cntn1P12960 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.59□□□□□ -0.07
Cntn1P12960 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cntn1P12960 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cntn1P12960 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cntn1P12960 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cntn1P12960 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Cntn1P12960 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cntn1P12960 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cntn1P12960 Gm17271-201ENSMUST00000165535 355 ntBASIC14.58□□□□□ -0.08
Cntn1P12960 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.58□□□□□ -0.08
Cntn1P12960 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.58□□□□□ -0.08
Cntn1P12960 Gm2756-201ENSMUST00000195851 400 ntBASIC14.58□□□□□ -0.08
Cntn1P12960 Gm43575-201ENSMUST00000196420 516 ntBASIC14.58□□□□□ -0.08
Cntn1P12960 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cntn1P12960 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cntn1P12960 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.58□□□□□ -0.08
Cntn1P12960 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cntn1P12960 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cntn1P12960 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.58□□□□□ -0.08
Cntn1P12960 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cntn1P12960 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cntn1P12960 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cntn1P12960 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.58□□□□□ -0.08
Cntn1P12960 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cntn1P12960 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cntn1P12960 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cntn1P12960 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cntn1P12960 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.57□□□□□ -0.08
Cntn1P12960 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.57□□□□□ -0.08
Cntn1P12960 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cntn1P12960 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cntn1P12960 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cntn1P12960 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cntn1P12960 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cntn1P12960 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Cntn1P12960 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cntn1P12960 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cntn1P12960 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Cntn1P12960 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cntn1P12960 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.57□□□□□ -0.08
Cntn1P12960 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cntn1P12960 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cntn1P12960 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cntn1P12960 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cntn1P12960 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cntn1P12960 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cntn1P12960 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cntn1P12960 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.57□□□□□ -0.08
Cntn1P12960 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cntn1P12960 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cntn1P12960 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.57□□□□□ -0.08
Cntn1P12960 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cntn1P12960 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.57□□□□□ -0.08
Cntn1P12960 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cntn1P12960 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cntn1P12960 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cntn1P12960 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cntn1P12960 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cntn1P12960 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cntn1P12960 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cntn1P12960 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.56□□□□□ -0.08
Cntn1P12960 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cntn1P12960 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cntn1P12960 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.56□□□□□ -0.08
Cntn1P12960 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cntn1P12960 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cntn1P12960 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cntn1P12960 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cntn1P12960 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.56□□□□□ -0.08
Cntn1P12960 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cntn1P12960 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cntn1P12960 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cntn1P12960 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms