Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cxcl1P12850 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cxcl1P12850 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.61□□□□□ -0.39
Cxcl1P12850 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.61□□□□□ -0.39
Cxcl1P12850 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.61□□□□□ -0.39
Cxcl1P12850 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.61□□□□□ -0.39
Cxcl1P12850 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.61□□□□□ -0.39
Cxcl1P12850 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.61□□□□□ -0.39
Cxcl1P12850 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.61□□□□□ -0.39
Cxcl1P12850 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cxcl1P12850 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.61□□□□□ -0.39
Cxcl1P12850 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.6□□□□□ -0.39
Cxcl1P12850 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cxcl1P12850 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cxcl1P12850 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.6□□□□□ -0.39
Cxcl1P12850 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Cxcl1P12850 Gm44454-201ENSMUST00000198541 138 ntBASIC12.6□□□□□ -0.39
Cxcl1P12850 Gm17808-201ENSMUST00000200859 894 ntBASIC12.6□□□□□ -0.39
Cxcl1P12850 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cxcl1P12850 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.6□□□□□ -0.39
Cxcl1P12850 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cxcl1P12850 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl1P12850 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cxcl1P12850 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.59□□□□□ -0.39
Cxcl1P12850 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.59□□□□□ -0.39
Cxcl1P12850 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.59□□□□□ -0.39
Cxcl1P12850 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Cxcl1P12850 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Cxcl1P12850 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.59□□□□□ -0.39
Cxcl1P12850 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cxcl1P12850 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.59□□□□□ -0.39
Cxcl1P12850 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cxcl1P12850 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms