Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc9P09633 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc9P09633 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Hoxc9P09633 Gm6539-201ENSMUST00000119157 1064 ntBASIC19.62■□□□□ 0.73
Hoxc9P09633 Gm13823-201ENSMUST00000119930 345 ntBASIC19.62■□□□□ 0.73
Hoxc9P09633 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc9P09633 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.62■□□□□ 0.73
Hoxc9P09633 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc9P09633 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc9P09633 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC19.62■□□□□ 0.73
Hoxc9P09633 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc9P09633 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc9P09633 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc9P09633 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc9P09633 AC164565.1-201ENSMUST00000217520 1484 ntBASIC19.61■□□□□ 0.73
Hoxc9P09633 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Hoxc9P09633 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc9P09633 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc9P09633 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc9P09633 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc9P09633 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Hoxc9P09633 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc9P09633 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc9P09633 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc9P09633 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC19.61■□□□□ 0.73
Hoxc9P09633 Gm27680-201ENSMUST00000184192 160 ntBASIC19.61■□□□□ 0.73
Hoxc9P09633 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC19.61■□□□□ 0.73
Hoxc9P09633 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc9P09633 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc9P09633 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc9P09633 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc9P09633 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc9P09633 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.61■□□□□ 0.73
Hoxc9P09633 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc9P09633 AC124751.1-201ENSMUST00000222716 1408 ntBASIC19.6■□□□□ 0.73
Hoxc9P09633 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc9P09633 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc9P09633 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc9P09633 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc9P09633 Gm14767-201ENSMUST00000121559 586 ntBASIC19.6■□□□□ 0.73
Hoxc9P09633 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.6■□□□□ 0.73
Hoxc9P09633 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Hoxc9P09633 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc9P09633 Gm7775-201ENSMUST00000218871 853 ntBASIC19.6■□□□□ 0.73
Hoxc9P09633 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc9P09633 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc9P09633 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc9P09633 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc9P09633 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.6■□□□□ 0.73
Hoxc9P09633 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc9P09633 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc9P09633 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc9P09633 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc9P09633 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Hoxc9P09633 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc9P09633 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc9P09633 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc9P09633 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hoxc9P09633 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc9P09633 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc9P09633 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc9P09633 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC19.59■□□□□ 0.73
Hoxc9P09633 Gm15487-201ENSMUST00000122373 465 ntBASIC19.59■□□□□ 0.73
Hoxc9P09633 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc9P09633 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc9P09633 Gm5745-201ENSMUST00000183748 313 ntBASIC19.59■□□□□ 0.73
Hoxc9P09633 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC19.59■□□□□ 0.73
Hoxc9P09633 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hoxc9P09633 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc9P09633 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Hoxc9P09633 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc9P09633 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc9P09633 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxc9P09633 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.73
Hoxc9P09633 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.58■□□□□ 0.73
Hoxc9P09633 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc9P09633 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc9P09633 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc9P09633 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.73
Hoxc9P09633 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc9P09633 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc9P09633 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc9P09633 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc9P09633 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxc9P09633 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxc9P09633 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxc9P09633 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxc9P09633 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
Hoxc9P09633 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxc9P09633 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.58■□□□□ 0.72
Hoxc9P09633 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Hoxc9P09633 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxc9P09633 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc9P09633 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc9P09633 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc9P09633 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc9P09633 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc9P09633 Gm5479-201ENSMUST00000160578 435 ntBASIC19.57■□□□□ 0.72
Hoxc9P09633 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxc9P09633 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms