Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.28■□□□□ 0.04
Hoxa9P09631 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxa9P09631 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxa9P09631 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxa9P09631 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxa9P09631 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.28■□□□□ 0.04
Hoxa9P09631 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hoxa9P09631 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa9P09631 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.27■□□□□ 0.04
Hoxa9P09631 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa9P09631 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa9P09631 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Hoxa9P09631 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa9P09631 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa9P09631 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa9P09631 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa9P09631 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa9P09631 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa9P09631 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa9P09631 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.27■□□□□ 0.04
Hoxa9P09631 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa9P09631 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa9P09631 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.27■□□□□ 0.04
Hoxa9P09631 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.27■□□□□ 0.04
Hoxa9P09631 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.27■□□□□ 0.04
Hoxa9P09631 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.27■□□□□ 0.04
Hoxa9P09631 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Hoxa9P09631 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.27■□□□□ 0.04
Hoxa9P09631 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa9P09631 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa9P09631 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Hoxa9P09631 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hoxa9P09631 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa9P09631 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa9P09631 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa9P09631 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa9P09631 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa9P09631 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa9P09631 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.27■□□□□ 0.03
Hoxa9P09631 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa9P09631 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa9P09631 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa9P09631 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Hoxa9P09631 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Hoxa9P09631 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa9P09631 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa9P09631 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa9P09631 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hoxa9P09631 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.26■□□□□ 0.03
Hoxa9P09631 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa9P09631 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa9P09631 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.26■□□□□ 0.03
Hoxa9P09631 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa9P09631 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa9P09631 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa9P09631 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.26■□□□□ 0.03
Hoxa9P09631 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa9P09631 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa9P09631 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.26■□□□□ 0.03
Hoxa9P09631 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa9P09631 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa9P09631 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa9P09631 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa9P09631 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.26■□□□□ 0.03
Hoxa9P09631 Gm43125-201ENSMUST00000201724 730 ntBASIC15.26■□□□□ 0.03
Hoxa9P09631 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.26■□□□□ 0.03
Hoxa9P09631 Gm18057-201ENSMUST00000208220 503 ntBASIC15.26■□□□□ 0.03
Hoxa9P09631 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.26■□□□□ 0.03
Hoxa9P09631 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.26■□□□□ 0.03
Hoxa9P09631 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa9P09631 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa9P09631 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa9P09631 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Hoxa9P09631 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.26■□□□□ 0.03
Hoxa9P09631 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Hoxa9P09631 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hoxa9P09631 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa9P09631 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa9P09631 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa9P09631 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa9P09631 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa9P09631 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa9P09631 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa9P09631 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa9P09631 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Hoxa9P09631 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa9P09631 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa9P09631 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.25■□□□□ 0.03
Hoxa9P09631 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa9P09631 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa9P09631 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa9P09631 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa9P09631 Gm9385-201ENSMUST00000117563 472 ntBASIC15.25■□□□□ 0.03
Hoxa9P09631 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.25■□□□□ 0.03
Hoxa9P09631 Gm10499-201ENSMUST00000174094 934 ntBASIC15.25■□□□□ 0.03
Hoxa9P09631 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.25■□□□□ 0.03
Hoxa9P09631 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.25■□□□□ 0.03
Hoxa9P09631 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Hoxa9P09631 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxa9P09631 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms