Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a1P02463 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.49■□□□□ 0.55
Col4a1P02463 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Col4a1P02463 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a1P02463 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.49■□□□□ 0.55
Col4a1P02463 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a1P02463 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.48■□□□□ 0.55
Col4a1P02463 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a1P02463 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a1P02463 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.48■□□□□ 0.55
Col4a1P02463 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a1P02463 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a1P02463 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a1P02463 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a1P02463 Syt7-205ENSMUST00000224135 1557 ntBASIC18.48■□□□□ 0.55
Col4a1P02463 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a1P02463 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a1P02463 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a1P02463 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a1P02463 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a1P02463 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.48■□□□□ 0.55
Col4a1P02463 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a1P02463 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Col4a1P02463 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Col4a1P02463 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a1P02463 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a1P02463 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a1P02463 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.47■□□□□ 0.55
Col4a1P02463 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a1P02463 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a1P02463 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.47■□□□□ 0.55
Col4a1P02463 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Col4a1P02463 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a1P02463 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a1P02463 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a1P02463 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a1P02463 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a1P02463 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Col4a1P02463 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a1P02463 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a1P02463 Gm37230-201ENSMUST00000194491 818 ntBASIC18.47■□□□□ 0.55
Col4a1P02463 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a1P02463 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Col4a1P02463 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a1P02463 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Col4a1P02463 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a1P02463 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a1P02463 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a1P02463 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.46■□□□□ 0.55
Col4a1P02463 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Col4a1P02463 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Col4a1P02463 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a1P02463 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Col4a1P02463 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a1P02463 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Col4a1P02463 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Col4a1P02463 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a1P02463 Mir1897-201ENSMUST00000122581 272 ntBASIC18.46■□□□□ 0.55
Col4a1P02463 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Col4a1P02463 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.46■□□□□ 0.55
Col4a1P02463 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a1P02463 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a1P02463 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a1P02463 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a1P02463 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a1P02463 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a1P02463 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.46■□□□□ 0.54
Col4a1P02463 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a1P02463 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
Col4a1P02463 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a1P02463 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a1P02463 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a1P02463 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC18.45■□□□□ 0.54
Col4a1P02463 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a1P02463 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC18.45■□□□□ 0.54
Col4a1P02463 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a1P02463 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a1P02463 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a1P02463 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.45■□□□□ 0.54
Col4a1P02463 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a1P02463 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a1P02463 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a1P02463 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a1P02463 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a1P02463 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a1P02463 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a1P02463 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a1P02463 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a1P02463 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.44■□□□□ 0.54
Col4a1P02463 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.44■□□□□ 0.54
Col4a1P02463 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a1P02463 Gm16476-201ENSMUST00000221544 139 ntBASIC18.44■□□□□ 0.54
Col4a1P02463 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.44■□□□□ 0.54
Col4a1P02463 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a1P02463 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a1P02463 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a1P02463 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC18.44■□□□□ 0.54
Col4a1P02463 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a1P02463 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a1P02463 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms