Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Tp53P02340 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tp53P02340 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.42■□□□□ 0.22
Tp53P02340 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Tp53P02340 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tp53P02340 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.42■□□□□ 0.22
Tp53P02340 Gm7787-201ENSMUST00000216858 688 ntBASIC16.42■□□□□ 0.22
Tp53P02340 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.42■□□□□ 0.22
Tp53P02340 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tp53P02340 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tp53P02340 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tp53P02340 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tp53P02340 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Tp53P02340 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tp53P02340 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tp53P02340 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.42■□□□□ 0.22
Tp53P02340 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tp53P02340 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tp53P02340 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tp53P02340 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tp53P02340 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tp53P02340 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tp53P02340 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tp53P02340 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Tp53P02340 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tp53P02340 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.41■□□□□ 0.22
Tp53P02340 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Tp53P02340 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
Tp53P02340 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Tp53P02340 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Tp53P02340 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Tp53P02340 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tp53P02340 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tp53P02340 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Gm1401-201ENSMUST00000122048 772 ntBASIC16.4■□□□□ 0.22
Tp53P02340 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.4■□□□□ 0.22
Tp53P02340 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.4■□□□□ 0.22
Tp53P02340 Gm27300-201ENSMUST00000184085 97 ntBASIC16.4■□□□□ 0.22
Tp53P02340 Gm27335-201ENSMUST00000184758 97 ntBASIC16.4■□□□□ 0.22
Tp53P02340 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
Tp53P02340 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.4■□□□□ 0.22
Tp53P02340 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tp53P02340 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Tp53P02340 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tp53P02340 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tp53P02340 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tp53P02340 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tp53P02340 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tp53P02340 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Tp53P02340 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tp53P02340 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tp53P02340 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Tp53P02340 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tp53P02340 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tp53P02340 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tp53P02340 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Tp53P02340 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tp53P02340 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.39■□□□□ 0.21
Tp53P02340 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tp53P02340 Gm37935-201ENSMUST00000192012 982 ntBASIC16.39■□□□□ 0.21
Tp53P02340 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tp53P02340 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.39■□□□□ 0.21
Tp53P02340 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Tp53P02340 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tp53P02340 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms