Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Igh-VJ558P01758 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Mir8098-201ENSMUST00000184011 137 ntBASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Gm43767-201ENSMUST00000198933 381 ntBASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Gm45167-201ENSMUST00000208007 322 ntBASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Gm10060-201ENSMUST00000212002 111 ntBASIC13.13□□□□□ -0.31
Igh-VJ558P01758 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igh-VJ558P01758 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Gm13884-201ENSMUST00000118103 829 ntBASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 AV026068-213ENSMUST00000223675 1171 ntBASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms