Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sp1O89090 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.32■□□□□ 0.04
Sp1O89090 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sp1O89090 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.32■□□□□ 0.04
Sp1O89090 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.32■□□□□ 0.04
Sp1O89090 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Sp1O89090 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sp1O89090 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sp1O89090 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sp1O89090 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.32■□□□□ 0.04
Sp1O89090 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Sp1O89090 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sp1O89090 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.31■□□□□ 0.04
Sp1O89090 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.31■□□□□ 0.04
Sp1O89090 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sp1O89090 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.31■□□□□ 0.04
Sp1O89090 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.31■□□□□ 0.04
Sp1O89090 Gm44335-201ENSMUST00000196879 141 ntBASIC15.31■□□□□ 0.04
Sp1O89090 Gm44297-201ENSMUST00000198304 141 ntBASIC15.31■□□□□ 0.04
Sp1O89090 Gm44346-201ENSMUST00000198851 141 ntBASIC15.31■□□□□ 0.04
Sp1O89090 Gm43767-201ENSMUST00000198933 381 ntBASIC15.31■□□□□ 0.04
Sp1O89090 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.31■□□□□ 0.04
Sp1O89090 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.31■□□□□ 0.04
Sp1O89090 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.31■□□□□ 0.04
Sp1O89090 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.31■□□□□ 0.04
Sp1O89090 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.31■□□□□ 0.04
Sp1O89090 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sp1O89090 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.31■□□□□ 0.04
Sp1O89090 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Sp1O89090 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Sp1O89090 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sp1O89090 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.31■□□□□ 0.04
Sp1O89090 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sp1O89090 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sp1O89090 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sp1O89090 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sp1O89090 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Sp1O89090 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.3■□□□□ 0.04
Sp1O89090 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.3■□□□□ 0.04
Sp1O89090 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sp1O89090 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.3■□□□□ 0.04
Sp1O89090 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sp1O89090 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp1O89090 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Sp1O89090 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms