Protein–RNA interactions for Protein: O88940

Msc, Musculin, mousemouse

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MscO88940 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MscO88940 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MscO88940 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
MscO88940 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
MscO88940 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MscO88940 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MscO88940 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
MscO88940 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
MscO88940 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
MscO88940 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
MscO88940 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.67□□□□□ -0.22
MscO88940 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
MscO88940 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.67□□□□□ -0.22
MscO88940 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.67□□□□□ -0.22
MscO88940 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.67□□□□□ -0.22
MscO88940 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.67□□□□□ -0.22
MscO88940 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
MscO88940 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
MscO88940 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.67□□□□□ -0.22
MscO88940 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MscO88940 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
MscO88940 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
MscO88940 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
MscO88940 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.66□□□□□ -0.22
MscO88940 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Gm2272-201ENSMUST00000194903 582 ntBASIC13.66□□□□□ -0.22
MscO88940 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.66□□□□□ -0.22
MscO88940 Gm5364-201ENSMUST00000216789 889 ntBASIC13.66□□□□□ -0.22
MscO88940 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
MscO88940 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MscO88940 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.65□□□□□ -0.22
MscO88940 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.65□□□□□ -0.22
MscO88940 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Gm9727-201ENSMUST00000161387 555 ntBASIC13.65□□□□□ -0.22
MscO88940 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
MscO88940 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.65□□□□□ -0.22
MscO88940 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Gm44771-201ENSMUST00000206975 626 ntBASIC13.65□□□□□ -0.22
MscO88940 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.65□□□□□ -0.22
MscO88940 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.65□□□□□ -0.22
MscO88940 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.65□□□□□ -0.22
MscO88940 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.65□□□□□ -0.22
MscO88940 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
MscO88940 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
MscO88940 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
MscO88940 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MscO88940 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms