Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Gm10676-201ENSMUST00000098778 3221 ntBASIC10.8□□□□□ -0.68
Sh2d1aO88890 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Gm9172-201ENSMUST00000212092 954 ntBASIC10.8□□□□□ -0.68
Sh2d1aO88890 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC10.8□□□□□ -0.68
Sh2d1aO88890 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.8□□□□□ -0.68
Sh2d1aO88890 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sh2d1aO88890 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Gm12644-201ENSMUST00000119935 606 ntBASIC10.78□□□□□ -0.68
Sh2d1aO88890 Gm12895-201ENSMUST00000122214 226 ntBASIC10.78□□□□□ -0.68
Sh2d1aO88890 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Gm27357-201ENSMUST00000183754 135 ntBASIC10.78□□□□□ -0.68
Sh2d1aO88890 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC10.78□□□□□ -0.68
Sh2d1aO88890 Gm21362-201ENSMUST00000194272 928 ntBASIC10.78□□□□□ -0.68
Sh2d1aO88890 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.78□□□□□ -0.68
Sh2d1aO88890 AC153889.1-201ENSMUST00000219257 330 ntBASIC10.78□□□□□ -0.68
Sh2d1aO88890 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC10.78□□□□□ -0.68
Sh2d1aO88890 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sh2d1aO88890 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Sh2d1aO88890 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sh2d1aO88890 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC10.77□□□□□ -0.68
Sh2d1aO88890 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sh2d1aO88890 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sh2d1aO88890 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sh2d1aO88890 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms