Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.66□□□□□ -0.22
Cops3O88543 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Cops3O88543 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.66□□□□□ -0.22
Cops3O88543 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cops3O88543 Olfr129-201ENSMUST00000122318 993 ntBASIC13.66□□□□□ -0.22
Cops3O88543 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Cops3O88543 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cops3O88543 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cops3O88543 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Cops3O88543 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.66□□□□□ -0.22
Cops3O88543 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Grk6-207ENSMUST00000225925 2769 ntBASIC13.66□□□□□ -0.22
Cops3O88543 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops3O88543 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Cops3O88543 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.65□□□□□ -0.22
Cops3O88543 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Cops3O88543 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
Cops3O88543 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.65□□□□□ -0.22
Cops3O88543 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cops3O88543 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.65□□□□□ -0.22
Cops3O88543 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.65□□□□□ -0.22
Cops3O88543 Gm25016-201ENSMUST00000158399 131 ntBASIC13.65□□□□□ -0.22
Cops3O88543 Gm23634-201ENSMUST00000175071 91 ntBASIC13.65□□□□□ -0.22
Cops3O88543 Mir3081-201ENSMUST00000175305 84 ntBASIC13.65□□□□□ -0.22
Cops3O88543 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cops3O88543 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cops3O88543 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.65□□□□□ -0.22
Cops3O88543 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.65□□□□□ -0.22
Cops3O88543 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.65□□□□□ -0.22
Cops3O88543 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.65□□□□□ -0.22
Cops3O88543 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.65□□□□□ -0.22
Cops3O88543 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cops3O88543 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cops3O88543 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cops3O88543 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Cops3O88543 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cops3O88543 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Cops3O88543 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.64□□□□□ -0.23
Cops3O88543 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.64□□□□□ -0.23
Cops3O88543 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.64□□□□□ -0.23
Cops3O88543 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Cops3O88543 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Cops3O88543 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.64□□□□□ -0.23
Cops3O88543 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.64□□□□□ -0.23
Cops3O88543 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cops3O88543 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms