Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Gm23547-201ENSMUST00000158210 271 ntBASIC14.42□□□□□ -0.1
Tgfbr3O88393 Gm17837-201ENSMUST00000186435 985 ntBASIC14.42□□□□□ -0.1
Tgfbr3O88393 Gm38225-201ENSMUST00000194001 393 ntBASIC14.42□□□□□ -0.1
Tgfbr3O88393 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tgfbr3O88393 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.41□□□□□ -0.1
Tgfbr3O88393 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.41□□□□□ -0.1
Tgfbr3O88393 Gm15483-201ENSMUST00000120338 456 ntBASIC14.41□□□□□ -0.1
Tgfbr3O88393 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Gm5745-201ENSMUST00000183748 313 ntBASIC14.41□□□□□ -0.1
Tgfbr3O88393 Gm27306-201ENSMUST00000183970 107 ntBASIC14.41□□□□□ -0.1
Tgfbr3O88393 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.41□□□□□ -0.1
Tgfbr3O88393 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.41□□□□□ -0.1
Tgfbr3O88393 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.41□□□□□ -0.1
Tgfbr3O88393 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tgfbr3O88393 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.4□□□□□ -0.1
Tgfbr3O88393 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.4□□□□□ -0.1
Tgfbr3O88393 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.4□□□□□ -0.1
Tgfbr3O88393 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.4□□□□□ -0.1
Tgfbr3O88393 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.4□□□□□ -0.1
Tgfbr3O88393 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tgfbr3O88393 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.4□□□□□ -0.1
Tgfbr3O88393 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.39□□□□□ -0.11
Tgfbr3O88393 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Gm5866-201ENSMUST00000177881 973 ntBASIC14.39□□□□□ -0.11
Tgfbr3O88393 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.39□□□□□ -0.11
Tgfbr3O88393 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms