Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Gm16198-201ENSMUST00000118766 670 ntBASIC17.92■□□□□ 0.46
Slc4a4O88343 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.92■□□□□ 0.46
Slc4a4O88343 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc4a4O88343 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc4a4O88343 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc4a4O88343 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc4a4O88343 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Slc4a4O88343 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Slc4a4O88343 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc4a4O88343 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc4a4O88343 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc4a4O88343 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc4a4O88343 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc4a4O88343 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.92■□□□□ 0.46
Slc4a4O88343 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc4a4O88343 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Slc4a4O88343 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Slc4a4O88343 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.91■□□□□ 0.46
Slc4a4O88343 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc4a4O88343 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc4a4O88343 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc4a4O88343 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Slc4a4O88343 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Slc4a4O88343 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc4a4O88343 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc4a4O88343 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc4a4O88343 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc4a4O88343 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Slc4a4O88343 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc4a4O88343 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Slc4a4O88343 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc4a4O88343 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc4a4O88343 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc4a4O88343 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc4a4O88343 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.9■□□□□ 0.46
Slc4a4O88343 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc4a4O88343 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc4a4O88343 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc4a4O88343 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.9■□□□□ 0.46
Slc4a4O88343 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc4a4O88343 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Slc4a4O88343 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc4a4O88343 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.9■□□□□ 0.46
Slc4a4O88343 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.9■□□□□ 0.46
Slc4a4O88343 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc4a4O88343 Gm15427-201ENSMUST00000117288 531 ntBASIC17.9■□□□□ 0.46
Slc4a4O88343 Gm9385-201ENSMUST00000117563 472 ntBASIC17.9■□□□□ 0.46
Slc4a4O88343 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.9■□□□□ 0.46
Slc4a4O88343 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc4a4O88343 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc4a4O88343 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc4a4O88343 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc4a4O88343 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc4a4O88343 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Slc4a4O88343 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.89■□□□□ 0.46
Slc4a4O88343 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
Slc4a4O88343 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Slc4a4O88343 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Slc4a4O88343 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Gm23935-201ENSMUST00000102303 57 ntBASIC17.89■□□□□ 0.45
Slc4a4O88343 Gm24270-201ENSMUST00000102326 57 ntBASIC17.89■□□□□ 0.45
Slc4a4O88343 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.89■□□□□ 0.45
Slc4a4O88343 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Gm24245-201ENSMUST00000157318 57 ntBASIC17.89■□□□□ 0.45
Slc4a4O88343 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Slc4a4O88343 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Slc4a4O88343 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.89■□□□□ 0.45
Slc4a4O88343 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc4a4O88343 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.88■□□□□ 0.45
Slc4a4O88343 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Slc4a4O88343 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc4a4O88343 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Slc4a4O88343 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc4a4O88343 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc4a4O88343 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc4a4O88343 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.88■□□□□ 0.45
Slc4a4O88343 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.88■□□□□ 0.45
Slc4a4O88343 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.88■□□□□ 0.45
Slc4a4O88343 Gm2272-201ENSMUST00000194903 582 ntBASIC17.88■□□□□ 0.45
Slc4a4O88343 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.88■□□□□ 0.45
Slc4a4O88343 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.88■□□□□ 0.45
Slc4a4O88343 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.88■□□□□ 0.45
Slc4a4O88343 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc4a4O88343 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc4a4O88343 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms