Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfdp1O88271 Gm27301-201ENSMUST00000184012 127 ntBASIC18.93■□□□□ 0.62
Cfdp1O88271 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cfdp1O88271 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.93■□□□□ 0.62
Cfdp1O88271 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfdp1O88271 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfdp1O88271 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cfdp1O88271 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.93■□□□□ 0.62
Cfdp1O88271 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfdp1O88271 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cfdp1O88271 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfdp1O88271 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfdp1O88271 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cfdp1O88271 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfdp1O88271 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfdp1O88271 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cfdp1O88271 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
Cfdp1O88271 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Gm23935-201ENSMUST00000102303 57 ntBASIC18.92■□□□□ 0.62
Cfdp1O88271 Gm24270-201ENSMUST00000102326 57 ntBASIC18.92■□□□□ 0.62
Cfdp1O88271 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.92■□□□□ 0.62
Cfdp1O88271 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Cfdp1O88271 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cfdp1O88271 Gm24245-201ENSMUST00000157318 57 ntBASIC18.92■□□□□ 0.62
Cfdp1O88271 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cfdp1O88271 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cfdp1O88271 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.92■□□□□ 0.62
Cfdp1O88271 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.92■□□□□ 0.62
Cfdp1O88271 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.92■□□□□ 0.62
Cfdp1O88271 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.92■□□□□ 0.62
Cfdp1O88271 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfdp1O88271 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Cfdp1O88271 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cfdp1O88271 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.91■□□□□ 0.62
Cfdp1O88271 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.91■□□□□ 0.62
Cfdp1O88271 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cfdp1O88271 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cfdp1O88271 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cfdp1O88271 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cfdp1O88271 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 Gm16198-201ENSMUST00000118766 670 ntBASIC18.9■□□□□ 0.62
Cfdp1O88271 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cfdp1O88271 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.9■□□□□ 0.62
Cfdp1O88271 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cfdp1O88271 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfdp1O88271 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms