Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.49■□□□□ 0.71
Ubr1O70481 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr1O70481 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr1O70481 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr1O70481 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC19.49■□□□□ 0.71
Ubr1O70481 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC19.49■□□□□ 0.71
Ubr1O70481 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr1O70481 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr1O70481 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr1O70481 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr1O70481 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr1O70481 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ubr1O70481 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr1O70481 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC19.49■□□□□ 0.71
Ubr1O70481 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr1O70481 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr1O70481 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ubr1O70481 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC19.48■□□□□ 0.71
Ubr1O70481 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 Gm27838-201ENSMUST00000184829 128 ntBASIC19.48■□□□□ 0.71
Ubr1O70481 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Ubr1O70481 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.48■□□□□ 0.71
Ubr1O70481 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ubr1O70481 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ubr1O70481 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ubr1O70481 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC19.47■□□□□ 0.71
Ubr1O70481 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC19.47■□□□□ 0.71
Ubr1O70481 Gm6218-201ENSMUST00000219812 628 ntBASIC19.47■□□□□ 0.71
Ubr1O70481 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubr1O70481 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ubr1O70481 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubr1O70481 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubr1O70481 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubr1O70481 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ubr1O70481 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ubr1O70481 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ubr1O70481 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubr1O70481 Gm12490-201ENSMUST00000120255 560 ntBASIC19.47■□□□□ 0.71
Ubr1O70481 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubr1O70481 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ubr1O70481 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ubr1O70481 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubr1O70481 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ubr1O70481 Gm44616-201ENSMUST00000206417 1732 ntBASIC19.46■□□□□ 0.71
Ubr1O70481 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubr1O70481 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubr1O70481 Syt7-205ENSMUST00000224135 1557 ntBASIC19.46■□□□□ 0.71
Ubr1O70481 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubr1O70481 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubr1O70481 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ubr1O70481 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ubr1O70481 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ubr1O70481 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC19.46■□□□□ 0.71
Ubr1O70481 AC135669.1-201ENSMUST00000213585 412 ntBASIC19.46■□□□□ 0.71
Ubr1O70481 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubr1O70481 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubr1O70481 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC19.46■□□□□ 0.71
Ubr1O70481 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.46■□□□□ 0.71
Ubr1O70481 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubr1O70481 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Ubr1O70481 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubr1O70481 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC19.46■□□□□ 0.71
Ubr1O70481 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubr1O70481 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ubr1O70481 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Ubr1O70481 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubr1O70481 Gm4204-201ENSMUST00000110798 1231 ntBASIC19.45■□□□□ 0.7
Ubr1O70481 Gm14042-201ENSMUST00000120139 833 ntBASIC19.45■□□□□ 0.7
Ubr1O70481 Mir1897-201ENSMUST00000122581 272 ntBASIC19.45■□□□□ 0.7
Ubr1O70481 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC19.45■□□□□ 0.7
Ubr1O70481 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ubr1O70481 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ubr1O70481 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC19.45■□□□□ 0.7
Ubr1O70481 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC19.45■□□□□ 0.7
Ubr1O70481 Gm45453-201ENSMUST00000211758 853 ntBASIC19.45■□□□□ 0.7
Ubr1O70481 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubr1O70481 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubr1O70481 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubr1O70481 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ubr1O70481 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ubr1O70481 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubr1O70481 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubr1O70481 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubr1O70481 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC19.45■□□□□ 0.7
Ubr1O70481 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubr1O70481 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms