Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdlim1O70400 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim1O70400 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim1O70400 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim1O70400 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim1O70400 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim1O70400 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdlim1O70400 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15□□□□□ -0.01
Pdlim1O70400 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim1O70400 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim1O70400 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdlim1O70400 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pdlim1O70400 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15□□□□□ -0.01
Pdlim1O70400 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15□□□□□ -0.01
Pdlim1O70400 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim1O70400 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim1O70400 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim1O70400 Gm8242-201ENSMUST00000193029 1420 ntBASIC15□□□□□ -0.01
Pdlim1O70400 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Pdlim1O70400 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.99□□□□□ -0.01
Pdlim1O70400 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pdlim1O70400 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.99□□□□□ -0.01
Pdlim1O70400 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.99□□□□□ -0.01
Pdlim1O70400 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.99□□□□□ -0.01
Pdlim1O70400 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.99□□□□□ -0.01
Pdlim1O70400 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Pdlim1O70400 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pdlim1O70400 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim1O70400 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pdlim1O70400 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pdlim1O70400 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.98□□□□□ -0.01
Pdlim1O70400 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Pdlim1O70400 Gm12008-201ENSMUST00000117791 755 ntBASIC14.98□□□□□ -0.01
Pdlim1O70400 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.98□□□□□ -0.01
Pdlim1O70400 Gm2272-201ENSMUST00000194903 582 ntBASIC14.98□□□□□ -0.01
Pdlim1O70400 AW822252-206ENSMUST00000208904 237 ntBASIC14.98□□□□□ -0.01
Pdlim1O70400 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Pdlim1O70400 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.98□□□□□ -0.01
Pdlim1O70400 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 BC037039-201ENSMUST00000192003 2205 ntBASIC14.98□□□□□ -0.01
Pdlim1O70400 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pdlim1O70400 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Pdlim1O70400 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Pdlim1O70400 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim1O70400 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim1O70400 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim1O70400 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim1O70400 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim1O70400 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.97□□□□□ -0.01
Pdlim1O70400 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim1O70400 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim1O70400 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pdlim1O70400 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pdlim1O70400 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.97□□□□□ -0.01
Pdlim1O70400 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim1O70400 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim1O70400 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim1O70400 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim1O70400 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim1O70400 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pdlim1O70400 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms