Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.8□□□□□ -0.2
Pdlim3O70209 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pdlim3O70209 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Pdlim3O70209 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Gm11950-201ENSMUST00000121615 838 ntBASIC13.8□□□□□ -0.2
Pdlim3O70209 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.8□□□□□ -0.2
Pdlim3O70209 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.8□□□□□ -0.2
Pdlim3O70209 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.8□□□□□ -0.2
Pdlim3O70209 Gm9172-201ENSMUST00000212092 954 ntBASIC13.8□□□□□ -0.2
Pdlim3O70209 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.8□□□□□ -0.2
Pdlim3O70209 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.8□□□□□ -0.2
Pdlim3O70209 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.8□□□□□ -0.2
Pdlim3O70209 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pdlim3O70209 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
Pdlim3O70209 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim3O70209 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pdlim3O70209 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Pdlim3O70209 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.79□□□□□ -0.2
Pdlim3O70209 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.79□□□□□ -0.2
Pdlim3O70209 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.79□□□□□ -0.2
Pdlim3O70209 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.79□□□□□ -0.2
Pdlim3O70209 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pdlim3O70209 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.79□□□□□ -0.2
Pdlim3O70209 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.79□□□□□ -0.2
Pdlim3O70209 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim3O70209 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pdlim3O70209 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim3O70209 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim3O70209 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim3O70209 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim3O70209 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim3O70209 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pdlim3O70209 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.78□□□□□ -0.2
Pdlim3O70209 Gm15794-201ENSMUST00000120182 631 ntBASIC13.78□□□□□ -0.2
Pdlim3O70209 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim3O70209 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pdlim3O70209 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.78□□□□□ -0.2
Pdlim3O70209 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.78□□□□□ -0.2
Pdlim3O70209 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.78□□□□□ -0.2
Pdlim3O70209 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.78□□□□□ -0.2
Pdlim3O70209 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim3O70209 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pdlim3O70209 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim3O70209 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.78□□□□□ -0.2
Pdlim3O70209 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Pdlim3O70209 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim3O70209 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim3O70209 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pdlim3O70209 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms