Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prom1O54990 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.73■□□□□ 0.27
Prom1O54990 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prom1O54990 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prom1O54990 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prom1O54990 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.73■□□□□ 0.27
Prom1O54990 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.73■□□□□ 0.27
Prom1O54990 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.73■□□□□ 0.27
Prom1O54990 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.73■□□□□ 0.27
Prom1O54990 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.73■□□□□ 0.27
Prom1O54990 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prom1O54990 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prom1O54990 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prom1O54990 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prom1O54990 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prom1O54990 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.73■□□□□ 0.27
Prom1O54990 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Prom1O54990 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prom1O54990 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Prom1O54990 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prom1O54990 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prom1O54990 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Prom1O54990 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prom1O54990 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prom1O54990 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prom1O54990 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prom1O54990 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prom1O54990 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Prom1O54990 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.72■□□□□ 0.27
Prom1O54990 Gm17837-201ENSMUST00000186435 985 ntBASIC16.72■□□□□ 0.27
Prom1O54990 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.72■□□□□ 0.27
Prom1O54990 Gm5186-201ENSMUST00000218781 920 ntBASIC16.72■□□□□ 0.27
Prom1O54990 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prom1O54990 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prom1O54990 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prom1O54990 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Prom1O54990 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prom1O54990 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prom1O54990 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prom1O54990 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Prom1O54990 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Prom1O54990 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prom1O54990 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prom1O54990 Gm15693-201ENSMUST00000120470 637 ntBASIC16.71■□□□□ 0.27
Prom1O54990 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.71■□□□□ 0.27
Prom1O54990 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prom1O54990 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prom1O54990 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prom1O54990 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prom1O54990 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prom1O54990 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prom1O54990 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Prom1O54990 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prom1O54990 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Prom1O54990 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
Prom1O54990 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Prom1O54990 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Prom1O54990 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.7■□□□□ 0.26
Prom1O54990 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Prom1O54990 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.7■□□□□ 0.26
Prom1O54990 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.7■□□□□ 0.26
Prom1O54990 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.7■□□□□ 0.26
Prom1O54990 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Prom1O54990 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Prom1O54990 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.7■□□□□ 0.26
Prom1O54990 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prom1O54990 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.69■□□□□ 0.26
Prom1O54990 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.69■□□□□ 0.26
Prom1O54990 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.69■□□□□ 0.26
Prom1O54990 Gm11543-201ENSMUST00000120758 370 ntBASIC16.69■□□□□ 0.26
Prom1O54990 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.69■□□□□ 0.26
Prom1O54990 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Prom1O54990 Gm27920-201ENSMUST00000183953 96 ntBASIC16.69■□□□□ 0.26
Prom1O54990 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.69■□□□□ 0.26
Prom1O54990 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms