Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Tnfsf12O54907 Gm19164-201ENSMUST00000210667 640 ntBASIC12.53□□□□□ -0.4
Tnfsf12O54907 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf12O54907 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf12O54907 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tnfsf12O54907 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf12O54907 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf12O54907 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.53□□□□□ -0.4
Tnfsf12O54907 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf12O54907 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf12O54907 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf12O54907 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Tnfsf12O54907 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tnfsf12O54907 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tnfsf12O54907 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfsf12O54907 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfsf12O54907 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfsf12O54907 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfsf12O54907 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.52□□□□□ -0.4
Tnfsf12O54907 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfsf12O54907 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.51□□□□□ -0.41
Tnfsf12O54907 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tnfsf12O54907 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf12O54907 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Gm8344-201ENSMUST00000119813 856 ntBASIC12.5□□□□□ -0.41
Tnfsf12O54907 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Gm43347-201ENSMUST00000200226 580 ntBASIC12.5□□□□□ -0.41
Tnfsf12O54907 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tnfsf12O54907 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms