Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Npc1O35604 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Npc1O35604 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Npc1O35604 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Npc1O35604 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Npc1O35604 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Npc1O35604 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Npc1O35604 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Npc1O35604 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Npc1O35604 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.85□□□□□ -0.03
Npc1O35604 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Npc1O35604 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Npc1O35604 BC037039-201ENSMUST00000192003 2205 ntBASIC14.85□□□□□ -0.03
Npc1O35604 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.85□□□□□ -0.03
Npc1O35604 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.85□□□□□ -0.03
Npc1O35604 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.85□□□□□ -0.03
Npc1O35604 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.85□□□□□ -0.03
Npc1O35604 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Npc1O35604 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.85□□□□□ -0.03
Npc1O35604 Gm45167-201ENSMUST00000208007 322 ntBASIC14.85□□□□□ -0.03
Npc1O35604 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Npc1O35604 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Npc1O35604 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Npc1O35604 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Npc1O35604 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.84□□□□□ -0.03
Npc1O35604 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.84□□□□□ -0.03
Npc1O35604 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.84□□□□□ -0.03
Npc1O35604 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.84□□□□□ -0.03
Npc1O35604 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.84□□□□□ -0.03
Npc1O35604 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.84□□□□□ -0.03
Npc1O35604 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.84□□□□□ -0.03
Npc1O35604 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Npc1O35604 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Npc1O35604 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.84□□□□□ -0.03
Npc1O35604 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Npc1O35604 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Npc1O35604 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.83□□□□□ -0.03
Npc1O35604 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Npc1O35604 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.83□□□□□ -0.04
Npc1O35604 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Npc1O35604 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.83□□□□□ -0.04
Npc1O35604 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.83□□□□□ -0.04
Npc1O35604 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npc1O35604 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Npc1O35604 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Npc1O35604 Gm11779-201ENSMUST00000118541 368 ntBASIC14.83□□□□□ -0.04
Npc1O35604 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.83□□□□□ -0.04
Npc1O35604 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.83□□□□□ -0.04
Npc1O35604 Mir8117-201ENSMUST00000184773 107 ntBASIC14.83□□□□□ -0.04
Npc1O35604 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npc1O35604 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npc1O35604 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npc1O35604 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Npc1O35604 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npc1O35604 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npc1O35604 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Npc1O35604 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms