Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Tnfsf11O35235 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfsf11O35235 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfsf11O35235 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfsf11O35235 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.89□□□□□ -0.51
Tnfsf11O35235 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.89□□□□□ -0.51
Tnfsf11O35235 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Mir1668-201ENSMUST00000184114 107 ntBASIC11.89□□□□□ -0.51
Tnfsf11O35235 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfsf11O35235 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.88□□□□□ -0.51
Tnfsf11O35235 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.88□□□□□ -0.51
Tnfsf11O35235 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.88□□□□□ -0.51
Tnfsf11O35235 Gm7367-201ENSMUST00000057611 492 ntBASIC11.88□□□□□ -0.51
Tnfsf11O35235 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Tnfsf11O35235 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf11O35235 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms