Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ClockO08785 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ClockO08785 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
ClockO08785 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.47□□□□□ -0.09
ClockO08785 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.47□□□□□ -0.09
ClockO08785 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
ClockO08785 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClockO08785 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ClockO08785 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
ClockO08785 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClockO08785 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClockO08785 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
ClockO08785 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClockO08785 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.46□□□□□ -0.09
ClockO08785 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClockO08785 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClockO08785 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ClockO08785 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ClockO08785 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.46□□□□□ -0.09
ClockO08785 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClockO08785 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClockO08785 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClockO08785 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClockO08785 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClockO08785 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ClockO08785 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ClockO08785 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ClockO08785 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
ClockO08785 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ClockO08785 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ClockO08785 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ClockO08785 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
ClockO08785 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.45□□□□□ -0.1
ClockO08785 Mir5130-201ENSMUST00000175160 84 ntBASIC14.45□□□□□ -0.1
ClockO08785 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.45□□□□□ -0.1
ClockO08785 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.45□□□□□ -0.1
ClockO08785 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ClockO08785 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClockO08785 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
ClockO08785 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.44□□□□□ -0.1
ClockO08785 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ClockO08785 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.44□□□□□ -0.1
ClockO08785 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.44□□□□□ -0.1
ClockO08785 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Gm45058-201ENSMUST00000205810 766 ntBASIC14.44□□□□□ -0.1
ClockO08785 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ClockO08785 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClockO08785 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms